Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
ITGA1P56199 RNU6-647P-201ENST00000364243 107 ntBASIC2.58□□□□□ -2
ITGA1P56199 RNU6-309P-201ENST00000364573 106 ntBASIC2.58□□□□□ -2
ITGA1P56199 MIR891A-201ENST00000401237 79 ntBASIC2.58□□□□□ -2
ITGA1P56199 SRIP3-201ENST00000413200 219 ntBASIC2.58□□□□□ -2
ITGA1P56199 EDDM3CP-201ENST00000415977 425 ntBASIC2.58□□□□□ -2
ITGA1P56199 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.58□□□□□ -2
ITGA1P56199 AC018634.1-201ENST00000437554 401 ntBASIC2.58□□□□□ -2
ITGA1P56199 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.58□□□□□ -2
ITGA1P56199 AC096725.1-201ENST00000514266 313 ntBASIC2.58□□□□□ -2
ITGA1P56199 RNU5E-3P-201ENST00000515913 68 ntBASIC2.58□□□□□ -2
ITGA1P56199 SNORD33.1-201ENST00000516213 88 ntBASIC2.58□□□□□ -2
ITGA1P56199 RNU6-504P-201ENST00000516568 104 ntBASIC2.58□□□□□ -2
ITGA1P56199 RNU1-104P-201ENST00000517280 175 ntBASIC2.58□□□□□ -2
ITGA1P56199 MIR3616-201ENST00000584070 92 ntBASIC2.58□□□□□ -2
ITGA1P56199 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
ITGA1P56199 Y_RNA.99-201ENST00000363138 105 ntBASIC2.57□□□□□ -2
ITGA1P56199 RNU6-508P-201ENST00000363231 103 ntBASIC2.57□□□□□ -2
ITGA1P56199 Y_RNA.267-201ENST00000364679 109 ntBASIC2.57□□□□□ -2
ITGA1P56199 RNA5SP125-201ENST00000364843 120 ntBASIC2.57□□□□□ -2
ITGA1P56199 SNORD58C-201ENST00000365223 64 ntBASIC2.57□□□□□ -2
ITGA1P56199 SNORA25B-201ENST00000365507 128 ntBASIC2.57□□□□□ -2
ITGA1P56199 SNORA12.1-201ENST00000390873 148 ntBASIC2.57□□□□□ -2
ITGA1P56199 Y_RNA.630-201ENST00000411370 108 ntBASIC2.57□□□□□ -2
ITGA1P56199 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.57□□□□□ -2
ITGA1P56199 RNU6-589P-201ENST00000516485 107 ntBASIC2.57□□□□□ -2
ITGA1P56199 RNU6-341P-201ENST00000516973 96 ntBASIC2.57□□□□□ -2
ITGA1P56199 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.57□□□□□ -2
ITGA1P56199 U6.108-201ENST00000637764 58 ntBASIC2.57□□□□□ -2
ITGA1P56199 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
ITGA1P56199 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.57□□□□□ -2
ITGA1P56199 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ITGA1P56199 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ITGA1P56199 SNORD72-201ENST00000390994 80 ntBASIC2.56□□□□□ -2
ITGA1P56199 Y_RNA.617-201ENST00000410920 90 ntBASIC2.56□□□□□ -2
ITGA1P56199 HMGN2P35-201ENST00000412164 270 ntBASIC2.56□□□□□ -2
ITGA1P56199 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.56□□□□□ -2
ITGA1P56199 AL513328.1-201ENST00000446460 224 ntBASIC2.56□□□□□ -2
ITGA1P56199 RPS26P45-201ENST00000471748 340 ntBASIC2.56□□□□□ -2
ITGA1P56199 RNU1-142P-201ENST00000516682 145 ntBASIC2.56□□□□□ -2
ITGA1P56199 AL358944.1-201ENST00000528537 144 ntBASIC2.56□□□□□ -2
ITGA1P56199 MIR3129-201ENST00000581095 76 ntBASIC2.56□□□□□ -2
ITGA1P56199 AC108081.1-201ENST00000604358 221 ntBASIC2.56□□□□□ -2
ITGA1P56199 AL670379.3-201ENST00000605040 251 ntBASIC2.56□□□□□ -2
ITGA1P56199 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ITGA1P56199 SNORA1-201ENST00000384107 130 ntBASIC2.55□□□□□ -2
ITGA1P56199 AL445687.1-201ENST00000439946 251 ntBASIC2.55□□□□□ -2
ITGA1P56199 MTATP6P21-201ENST00000440681 189 ntBASIC2.55□□□□□ -2
ITGA1P56199 ATP5J2P3-201ENST00000451550 258 ntBASIC2.55□□□□□ -2
ITGA1P56199 RNU1-131P-201ENST00000458943 161 ntBASIC2.55□□□□□ -2
ITGA1P56199 ZNF271P-202ENST00000465539 1970 ntBASIC2.55□□□□□ -2
ITGA1P56199 CYCTP-201ENST00000504253 315 ntBASIC2.55□□□□□ -2
ITGA1P56199 AC008507.4-201ENST00000585464 127 ntBASIC2.55□□□□□ -2
ITGA1P56199 AL022345.2-201ENST00000606307 135 ntBASIC2.55□□□□□ -2
ITGA1P56199 MIR126-201ENST00000362291 85 ntBASIC2.54□□□□□ -2
ITGA1P56199 SNORA33-201ENST00000363664 130 ntBASIC2.54□□□□□ -2
ITGA1P56199 SNORD114-6-201ENST00000364393 72 ntBASIC2.54□□□□□ -2
ITGA1P56199 RNU6-755P-201ENST00000364400 103 ntBASIC2.54□□□□□ -2
ITGA1P56199 SNORD24-201ENST00000383884 75 ntBASIC2.54□□□□□ -2
ITGA1P56199 SNORA70B-201ENST00000384210 135 ntBASIC2.54□□□□□ -2
ITGA1P56199 SNORD61-201ENST00000384252 73 ntBASIC2.54□□□□□ -2
ITGA1P56199 RNA5SP323-201ENST00000391094 133 ntBASIC2.54□□□□□ -2
ITGA1P56199 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.54□□□□□ -2
ITGA1P56199 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.54□□□□□ -2
ITGA1P56199 RN7SL636P-201ENST00000497504 294 ntBASIC2.54□□□□□ -2
ITGA1P56199 RNU6-781P-201ENST00000516377 101 ntBASIC2.54□□□□□ -2
ITGA1P56199 RNU6-1270P-201ENST00000517128 108 ntBASIC2.54□□□□□ -2
ITGA1P56199 AC087685.1-201ENST00000587507 141 ntBASIC2.54□□□□□ -2
ITGA1P56199 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.54□□□□□ -2
ITGA1P56199 AL590808.1-201ENST00000618696 141 ntBASIC2.54□□□□□ -2
ITGA1P56199 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.54□□□□□ -2
ITGA1P56199 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.54□□□□□ -2
ITGA1P56199 RNU6-888P-201ENST00000363010 101 ntBASIC2.53□□□□□ -2
ITGA1P56199 RNA5SP68-201ENST00000363885 119 ntBASIC2.53□□□□□ -2
ITGA1P56199 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
ITGA1P56199 Y_RNA.242-201ENST00000364473 110 ntBASIC2.53□□□□□ -2
ITGA1P56199 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
ITGA1P56199 RNU6-1292P-201ENST00000383856 107 ntBASIC2.53□□□□□ -2
ITGA1P56199 RNU6-160P-201ENST00000384591 107 ntBASIC2.53□□□□□ -2
ITGA1P56199 MIR515-2-201ENST00000384883 83 ntBASIC2.53□□□□□ -2
ITGA1P56199 MIR515-1-201ENST00000384884 83 ntBASIC2.53□□□□□ -2
ITGA1P56199 AL117342.1-201ENST00000404861 406 ntBASIC2.53□□□□□ -2
ITGA1P56199 AF228730.3-201ENST00000436691 102 ntBASIC2.53□□□□□ -2
ITGA1P56199 Y_RNA.651-201ENST00000459380 103 ntBASIC2.53□□□□□ -2
ITGA1P56199 Y_RNA.714-201ENST00000517065 90 ntBASIC2.53□□□□□ -2
ITGA1P56199 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.53□□□□□ -2
ITGA1P56199 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
ITGA1P56199 MIR6817-201ENST00000615588 66 ntBASIC2.53□□□□□ -2
ITGA1P56199 AL591926.4-201ENST00000616895 298 ntBASIC2.53□□□□□ -2
ITGA1P56199 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
ITGA1P56199 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ITGA1P56199 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
ITGA1P56199 AC080100.1-201ENST00000624239 5356 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 RNA5SP393-201ENST00000363423 117 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 SNORA22-201ENST00000383907 134 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 SNORA8-201ENST00000384574 139 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 RNU6-1072P-201ENST00000384703 107 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 RNU6-443P-201ENST00000384780 107 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 MIR548A3-201ENST00000385297 97 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 AC009238.1-201ENST00000442165 424 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms