Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 Y_RNA.91-201ENST00000363042 107 ntBASIC2.31□□□□□ -2.04
CLK3P49761 Y_RNA.111-201ENST00000363248 100 ntBASIC2.31□□□□□ -2.04
CLK3P49761 Y_RNA.796-201ENST00000364268 102 ntBASIC2.31□□□□□ -2.04
CLK3P49761 Y_RNA.799-201ENST00000364992 102 ntBASIC2.31□□□□□ -2.04
CLK3P49761 RNU6-1138P-201ENST00000365359 106 ntBASIC2.31□□□□□ -2.04
CLK3P49761 RNU1-148P-201ENST00000384472 162 ntBASIC2.31□□□□□ -2.04
CLK3P49761 MIR562-201ENST00000384894 95 ntBASIC2.31□□□□□ -2.04
CLK3P49761 Y_RNA.617-201ENST00000410920 90 ntBASIC2.31□□□□□ -2.04
CLK3P49761 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.31□□□□□ -2.04
CLK3P49761 HMGN2P18-201ENST00000450680 270 ntBASIC2.31□□□□□ -2.04
CLK3P49761 SNORD33.1-201ENST00000516213 88 ntBASIC2.31□□□□□ -2.04
CLK3P49761 Y_RNA.690-201ENST00000516603 95 ntBASIC2.31□□□□□ -2.04
CLK3P49761 RNU7-172P-201ENST00000517125 64 ntBASIC2.31□□□□□ -2.04
CLK3P49761 RNA5SP490-201ENST00000517141 136 ntBASIC2.31□□□□□ -2.04
CLK3P49761 RNU2-60P-201ENST00000517290 128 ntBASIC2.31□□□□□ -2.04
CLK3P49761 MIR3126-201ENST00000577443 74 ntBASIC2.31□□□□□ -2.04
CLK3P49761 MIR4438-201ENST00000585271 93 ntBASIC2.31□□□□□ -2.04
CLK3P49761 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLK3P49761 MTND5P32-201ENST00000560711 1802 ntBASIC2.31□□□□□ -2.04
CLK3P49761 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CLK3P49761 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLK3P49761 RNU6-1209P-201ENST00000363655 107 ntBASIC2.3□□□□□ -2.04
CLK3P49761 RNA5SP68-201ENST00000363885 119 ntBASIC2.3□□□□□ -2.04
CLK3P49761 RNA5SP456-201ENST00000364002 114 ntBASIC2.3□□□□□ -2.04
CLK3P49761 SNORD114-30-201ENST00000364448 72 ntBASIC2.3□□□□□ -2.04
CLK3P49761 SNORD58C-201ENST00000365223 64 ntBASIC2.3□□□□□ -2.04
CLK3P49761 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CLK3P49761 Y_RNA.630-201ENST00000411370 108 ntBASIC2.3□□□□□ -2.04
CLK3P49761 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.3□□□□□ -2.04
CLK3P49761 RPS29P21-201ENST00000496272 170 ntBASIC2.3□□□□□ -2.04
CLK3P49761 OR9P1P-201ENST00000496431 281 ntBASIC2.3□□□□□ -2.04
CLK3P49761 RNA5SP24-201ENST00000516478 95 ntBASIC2.3□□□□□ -2.04
CLK3P49761 RNA5SP170-201ENST00000517150 101 ntBASIC2.3□□□□□ -2.04
CLK3P49761 AC011604.1-201ENST00000545978 196 ntBASIC2.3□□□□□ -2.04
CLK3P49761 AC026271.5-201ENST00000577873 130 ntBASIC2.3□□□□□ -2.04
CLK3P49761 AC091178.2-201ENST00000584401 117 ntBASIC2.3□□□□□ -2.04
CLK3P49761 MIR6840-201ENST00000611937 71 ntBASIC2.3□□□□□ -2.04
CLK3P49761 MIR6817-201ENST00000615588 66 ntBASIC2.3□□□□□ -2.04
CLK3P49761 Pinc.1-201ENST00000616452 154 ntBASIC2.3□□□□□ -2.04
CLK3P49761 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.3□□□□□ -2.04
CLK3P49761 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.3□□□□□ -2.04
CLK3P49761 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CLK3P49761 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLK3P49761 MIR21-201ENST00000362134 72 ntBASIC2.29□□□□□ -2.04
CLK3P49761 RNU6-147P-201ENST00000383983 107 ntBASIC2.29□□□□□ -2.04
CLK3P49761 MIR624-201ENST00000385217 97 ntBASIC2.29□□□□□ -2.04
CLK3P49761 MIR548A3-201ENST00000385297 97 ntBASIC2.29□□□□□ -2.04
CLK3P49761 SRIP3-201ENST00000413200 219 ntBASIC2.29□□□□□ -2.04
CLK3P49761 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.29□□□□□ -2.04
CLK3P49761 MTCO1P44-201ENST00000441935 243 ntBASIC2.29□□□□□ -2.04
CLK3P49761 RPS26P45-201ENST00000471748 340 ntBASIC2.29□□□□□ -2.04
CLK3P49761 RNU6-991P-201ENST00000516168 107 ntBASIC2.29□□□□□ -2.04
CLK3P49761 SNORA18.4-201ENST00000516440 124 ntBASIC2.29□□□□□ -2.04
CLK3P49761 RNU7-149P-201ENST00000516739 59 ntBASIC2.29□□□□□ -2.04
CLK3P49761 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.29□□□□□ -2.04
CLK3P49761 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.29□□□□□ -2.04
CLK3P49761 AP006437.1-201ENST00000641440 3685 ntBASIC2.29□□□□□ -2.04
CLK3P49761 AL136360.1-201ENST00000503377 1900 ntBASIC2.29□□□□□ -2.04
CLK3P49761 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLK3P49761 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.28□□□□□ -2.04
CLK3P49761 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLK3P49761 Y_RNA.309-201ENST00000365046 111 ntBASIC2.28□□□□□ -2.04
CLK3P49761 RNU1-51P-201ENST00000365345 176 ntBASIC2.28□□□□□ -2.04
CLK3P49761 SNORD116-21-201ENST00000384507 92 ntBASIC2.28□□□□□ -2.04
CLK3P49761 MIR524-201ENST00000385242 87 ntBASIC2.28□□□□□ -2.04
CLK3P49761 RNA5SP127-201ENST00000411051 133 ntBASIC2.28□□□□□ -2.04
CLK3P49761 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
CLK3P49761 AC093259.1-201ENST00000509755 300 ntBASIC2.28□□□□□ -2.04
CLK3P49761 MIR3162-201ENST00000581818 82 ntBASIC2.28□□□□□ -2.04
CLK3P49761 AL365205.2-201ENST00000594586 68 ntBASIC2.28□□□□□ -2.04
CLK3P49761 AC080100.1-201ENST00000624239 5356 ntBASIC2.28□□□□□ -2.04
CLK3P49761 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLK3P49761 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLK3P49761 Y_RNA.52-201ENST00000362760 96 ntBASIC2.27□□□□□ -2.05
CLK3P49761 RNU6-1255P-201ENST00000363434 112 ntBASIC2.27□□□□□ -2.05
CLK3P49761 RNU6-309P-201ENST00000364573 106 ntBASIC2.27□□□□□ -2.05
CLK3P49761 Y_RNA.346-201ENST00000365385 112 ntBASIC2.27□□□□□ -2.05
CLK3P49761 Y_RNA.486-201ENST00000384398 107 ntBASIC2.27□□□□□ -2.05
CLK3P49761 MIRLET7F2-201ENST00000385277 83 ntBASIC2.27□□□□□ -2.05
CLK3P49761 MIR891A-201ENST00000401237 79 ntBASIC2.27□□□□□ -2.05
CLK3P49761 EDDM3CP-201ENST00000415977 425 ntBASIC2.27□□□□□ -2.05
CLK3P49761 MTATP6P21-201ENST00000440681 189 ntBASIC2.27□□□□□ -2.05
CLK3P49761 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.27□□□□□ -2.05
CLK3P49761 RN7SKP19-201ENST00000516016 252 ntBASIC2.27□□□□□ -2.05
CLK3P49761 RNA5SP148-201ENST00000516527 94 ntBASIC2.27□□□□□ -2.05
CLK3P49761 RNU6-365P-201ENST00000517113 106 ntBASIC2.27□□□□□ -2.05
CLK3P49761 AC006023.1-201ENST00000603944 259 ntBASIC2.27□□□□□ -2.05
CLK3P49761 SNORD14A-201ENST00000606526 91 ntBASIC2.27□□□□□ -2.05
CLK3P49761 JPX_2.1-201ENST00000614161 69 ntBASIC2.27□□□□□ -2.05
CLK3P49761 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
CLK3P49761 U6.73-201ENST00000619194 103 ntBASIC2.27□□□□□ -2.05
CLK3P49761 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CLK3P49761 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLK3P49761 Y_RNA.66-201ENST00000362862 102 ntBASIC2.26□□□□□ -2.05
CLK3P49761 Y_RNA.510-201ENST00000384511 114 ntBASIC2.26□□□□□ -2.05
CLK3P49761 MIR520G-201ENST00000385064 90 ntBASIC2.26□□□□□ -2.05
CLK3P49761 AC123900.1-201ENST00000420390 96 ntBASIC2.26□□□□□ -2.05
CLK3P49761 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.26□□□□□ -2.05
CLK3P49761 AC108938.1-201ENST00000451204 136 ntBASIC2.26□□□□□ -2.05
CLK3P49761 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms