Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 SRIP3-201ENST00000413200 219 ntBASIC4.09□□□□□ -1.75
PRIM1P49642 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.09□□□□□ -1.75
PRIM1P49642 RN7SKP132-201ENST00000516001 208 ntBASIC4.09□□□□□ -1.75
PRIM1P49642 MIR4694-201ENST00000578534 80 ntBASIC4.09□□□□□ -1.75
PRIM1P49642 MIR5047-201ENST00000579212 100 ntBASIC4.09□□□□□ -1.75
PRIM1P49642 uc_338.25-201ENST00000613756 156 ntBASIC4.09□□□□□ -1.75
PRIM1P49642 CTSLP2-204ENST00000629029 392 ntBASIC4.09□□□□□ -1.75
PRIM1P49642 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRIM1P49642 Y_RNA.299-201ENST00000364973 94 ntBASIC4.08□□□□□ -1.76
PRIM1P49642 MIR218-1-201ENST00000384999 110 ntBASIC4.08□□□□□ -1.76
PRIM1P49642 CST2P1-201ENST00000425770 87 ntBASIC4.08□□□□□ -1.76
PRIM1P49642 SNRPGP14-201ENST00000435400 219 ntBASIC4.08□□□□□ -1.76
PRIM1P49642 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.08□□□□□ -1.76
PRIM1P49642 AL135938.1-201ENST00000443141 297 ntBASIC4.08□□□□□ -1.76
PRIM1P49642 RNU6-1041P-201ENST00000516254 102 ntBASIC4.08□□□□□ -1.76
PRIM1P49642 SNORD36C-201ENST00000516733 66 ntBASIC4.08□□□□□ -1.76
PRIM1P49642 AC078899.2-201ENST00000595282 212 ntBASIC4.08□□□□□ -1.76
PRIM1P49642 AC091932.4-201ENST00000623386 200 ntBASIC4.08□□□□□ -1.76
PRIM1P49642 U6.98-201ENST00000637157 84 ntBASIC4.08□□□□□ -1.76
PRIM1P49642 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRIM1P49642 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRIM1P49642 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.08□□□□□ -1.76
PRIM1P49642 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRIM1P49642 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRIM1P49642 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.07□□□□□ -1.76
PRIM1P49642 AC091152.2-201ENST00000591628 2569 ntBASIC4.07□□□□□ -1.76
PRIM1P49642 RNU6-1099P-201ENST00000363533 107 ntBASIC4.07□□□□□ -1.76
PRIM1P49642 SNORD15B-201ENST00000384714 146 ntBASIC4.07□□□□□ -1.76
PRIM1P49642 RNU6-1104P-201ENST00000384723 104 ntBASIC4.07□□□□□ -1.76
PRIM1P49642 ARF4P2-201ENST00000430209 526 ntBASIC4.07□□□□□ -1.76
PRIM1P49642 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.07□□□□□ -1.76
PRIM1P49642 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.07□□□□□ -1.76
PRIM1P49642 MIR7153-201ENST00000637758 57 ntBASIC4.07□□□□□ -1.76
PRIM1P49642 U6.108-201ENST00000637764 58 ntBASIC4.07□□□□□ -1.76
PRIM1P49642 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.07□□□□□ -1.76
PRIM1P49642 AL353746.1-201ENST00000566293 6881 ntBASIC4.07□□□□□ -1.76
PRIM1P49642 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PRIM1P49642 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PRIM1P49642 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PRIM1P49642 Y_RNA.17-201ENST00000362433 111 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 Y_RNA.99-201ENST00000363138 105 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 RNU6-242P-201ENST00000384359 107 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 SNORD38C-201ENST00000384381 69 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 RNA5SP293-201ENST00000410527 113 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 AL022718.1-201ENST00000412004 84 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 AC022018.1-201ENST00000430685 241 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 AC108938.1-201ENST00000451204 136 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 ATP5J2P3-201ENST00000451550 258 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 RNA5SP367-201ENST00000516557 118 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 SNORD45.4-201ENST00000516629 73 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 MIR7515-201ENST00000637837 67 ntBASIC4.06□□□□□ -1.76
PRIM1P49642 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRIM1P49642 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRIM1P49642 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRIM1P49642 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRIM1P49642 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.05□□□□□ -1.76
PRIM1P49642 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRIM1P49642 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PRIM1P49642 SNORD115-19-201ENST00000363098 82 ntBASIC4.05□□□□□ -1.76
PRIM1P49642 SNORD115-18-201ENST00000363293 82 ntBASIC4.05□□□□□ -1.76
PRIM1P49642 SNORD115-17-201ENST00000364612 82 ntBASIC4.05□□□□□ -1.76
PRIM1P49642 SNORA80E-201ENST00000384744 137 ntBASIC4.05□□□□□ -1.76
PRIM1P49642 AC104027.1-201ENST00000521887 300 ntBASIC4.05□□□□□ -1.76
PRIM1P49642 AC007536.1-201ENST00000533382 349 ntBASIC4.05□□□□□ -1.76
PRIM1P49642 ELOCP29-201ENST00000588193 334 ntBASIC4.05□□□□□ -1.76
PRIM1P49642 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PRIM1P49642 IGLL4P-201ENST00000614590 133 ntBASIC4.05□□□□□ -1.76
PRIM1P49642 PWAR6-201ENST00000552334 4618 ntBASIC4.05□□□□□ -1.76
PRIM1P49642 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRIM1P49642 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PRIM1P49642 FAM35CP-201ENST00000554755 2470 ntBASIC4.04□□□□□ -1.76
PRIM1P49642 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRIM1P49642 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.04□□□□□ -1.76
PRIM1P49642 RNU1-23P-201ENST00000363361 144 ntBASIC4.04□□□□□ -1.76
PRIM1P49642 RNY1P1-201ENST00000364372 112 ntBASIC4.04□□□□□ -1.76
PRIM1P49642 SNORA4.2-201ENST00000365313 147 ntBASIC4.04□□□□□ -1.76
PRIM1P49642 SNORD67-201ENST00000390833 111 ntBASIC4.04□□□□□ -1.76
PRIM1P49642 XIST_intron.1-201ENST00000619444 68 ntBASIC4.04□□□□□ -1.76
PRIM1P49642 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRIM1P49642 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.03□□□□□ -1.76
PRIM1P49642 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC4.03□□□□□ -1.76
PRIM1P49642 MIR22-201ENST00000362190 85 ntBASIC4.03□□□□□ -1.76
PRIM1P49642 Y_RNA.593-201ENST00000410292 98 ntBASIC4.03□□□□□ -1.76
PRIM1P49642 RNU6-733P-201ENST00000410759 104 ntBASIC4.03□□□□□ -1.76
PRIM1P49642 RNU6-938P-201ENST00000411285 103 ntBASIC4.03□□□□□ -1.76
PRIM1P49642 AC004941.2-201ENST00000427009 228 ntBASIC4.03□□□□□ -1.76
PRIM1P49642 RNU2-35P-201ENST00000516446 142 ntBASIC4.03□□□□□ -1.76
PRIM1P49642 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.03□□□□□ -1.76
PRIM1P49642 AC022523.2-201ENST00000561045 150 ntBASIC4.03□□□□□ -1.76
PRIM1P49642 AL355297.2-201ENST00000604792 129 ntBASIC4.03□□□□□ -1.76
PRIM1P49642 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.03□□□□□ -1.77
PRIM1P49642 RNU6-363P-201ENST00000362895 105 ntBASIC4.02□□□□□ -1.77
PRIM1P49642 RNY1P10-201ENST00000363268 113 ntBASIC4.02□□□□□ -1.77
PRIM1P49642 SNORA33-201ENST00000363664 130 ntBASIC4.02□□□□□ -1.77
PRIM1P49642 RNU6-805P-201ENST00000365643 106 ntBASIC4.02□□□□□ -1.77
PRIM1P49642 RNU6-409P-201ENST00000384114 104 ntBASIC4.02□□□□□ -1.77
PRIM1P49642 RNU2-48P-201ENST00000410694 191 ntBASIC4.02□□□□□ -1.77
PRIM1P49642 RNU7-96P-201ENST00000459535 64 ntBASIC4.02□□□□□ -1.77
PRIM1P49642 RPS23P4-201ENST00000487908 423 ntBASIC4.02□□□□□ -1.77
PRIM1P49642 MIR4319-201ENST00000577285 85 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms