Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 Y_RNA.581-201ENST00000391017 97 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 ELOCP20-201ENST00000422460 345 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 MTND4LP30-201ENST00000454092 297 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 COX6CP14-201ENST00000469580 174 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 RNA5SP168-201ENST00000516642 112 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 RNU6-902P-201ENST00000517212 91 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.29□□□□□ -2.2
NEDD4P46934 AC008269.2-201ENST00000561915 1105 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.28□□□□□ -2.2
NEDD4P46934 Y_RNA.19-201ENST00000362462 99 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 Y_RNA.210-201ENST00000364161 110 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 Y_RNA.224-201ENST00000364308 111 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 RNA5SP259-201ENST00000365541 109 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 RNU6-424P-201ENST00000384367 105 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 Y_RNA.569-201ENST00000384749 103 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 Y_RNA.602-201ENST00000410535 92 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 Y_RNA.621-201ENST00000411065 96 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 LINC01399-202ENST00000458450 244 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 AC010655.3-201ENST00000478818 450 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 RNY3P15-201ENST00000516297 97 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 RNU6-1137P-201ENST00000517073 99 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 AC136628.3-201ENST00000521868 290 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
NEDD4P46934 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
NEDD4P46934 AC068647.2-201ENST00000637380 353 ntBASIC1.28□□□□□ -2.2
NEDD4P46934 SNORA63-201ENST00000363450 132 ntBASIC1.27□□□□□ -2.21
NEDD4P46934 RNU4-41P-201ENST00000364426 143 ntBASIC1.27□□□□□ -2.21
NEDD4P46934 SNX2P2-201ENST00000424553 323 ntBASIC1.27□□□□□ -2.21
NEDD4P46934 Z98949.2-201ENST00000440996 144 ntBASIC1.27□□□□□ -2.21
NEDD4P46934 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.27□□□□□ -2.21
NEDD4P46934 HSPE1P25-201ENST00000455484 251 ntBASIC1.27□□□□□ -2.21
NEDD4P46934 SUMO2P16-201ENST00000519475 264 ntBASIC1.27□□□□□ -2.21
NEDD4P46934 AC006504.6-201ENST00000590142 199 ntBASIC1.27□□□□□ -2.21
NEDD4P46934 POLR3GP1-201ENST00000594073 261 ntBASIC1.27□□□□□ -2.21
NEDD4P46934 AP003357.1-201ENST00000604497 148 ntBASIC1.27□□□□□ -2.21
NEDD4P46934 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
NEDD4P46934 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NEDD4P46934 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
NEDD4P46934 AL161722.3-201ENST00000605789 2983 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 Y_RNA.153-201ENST00000363615 91 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 Y_RNA.191-201ENST00000363972 113 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 Y_RNA.326-201ENST00000365176 113 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 RNU6-1080P-201ENST00000383982 107 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 U8.16-201ENST00000391279 133 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 AL590004.1-201ENST00000405321 300 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 RNU6-121P-201ENST00000410525 99 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 CALM2P4-201ENST00000430810 426 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 AL731563.1-201ENST00000442202 214 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 snoU13.18-201ENST00000459483 104 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 RNU6-191P-201ENST00000516295 94 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.26□□□□□ -2.21
NEDD4P46934 AP003072.1-201ENST00000531740 145 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.26□□□□□ -2.21
NEDD4P46934 MIR3937-201ENST00000580135 106 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 MIR3145-201ENST00000580727 82 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 MIR4762-201ENST00000585261 75 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 SNORD114-21-201ENST00000606412 72 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 Y_RNA.812-201ENST00000610788 101 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 Y_RNA.784-201ENST00000613803 101 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 Y_RNA.787-201ENST00000616522 101 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 Y_RNA.780-201ENST00000617336 101 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 Y_RNA.801-201ENST00000619005 101 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 AL121890.5-201ENST00000620848 304 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 AC027279.3-201ENST00000625055 122 ntBASIC1.26□□□□□ -2.21
NEDD4P46934 MIRLET7C-201ENST00000362160 84 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 RNU4-80P-201ENST00000363200 141 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 Y_RNA.122-201ENST00000363331 96 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 SNORD114-27-201ENST00000363766 70 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 U8.5-201ENST00000364528 136 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 RNU6-326P-201ENST00000365480 107 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 Y_RNA.418-201ENST00000384029 102 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 MIR489-201ENST00000384923 84 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 SNORA53-201ENST00000391141 249 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 MRPS35P2-201ENST00000508242 191 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 RNU7-12P-201ENST00000516030 62 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 Y_RNA.714-201ENST00000517065 90 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.25□□□□□ -2.21
NEDD4P46934 AL513534.2-201ENST00000603836 250 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 AC037487.3-201ENST00000606668 112 ntBASIC1.25□□□□□ -2.21
NEDD4P46934 RNU6-199P-201ENST00000362954 107 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 Y_RNA.105-201ENST00000363182 111 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 RNU6-833P-201ENST00000363486 107 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 RNU6-290P-201ENST00000365212 101 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 RNU6-102P-201ENST00000384485 104 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.24□□□□□ -2.21
NEDD4P46934 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.24□□□□□ -2.21
NEDD4P46934 RPL39P38-201ENST00000467018 153 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 RNU7-115P-201ENST00000516433 55 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 RNU2-31P-201ENST00000516954 155 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 MIR4452-201ENST00000583004 71 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 SNORA4-201ENST00000584302 138 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 MIR6767-201ENST00000637302 66 ntBASIC1.24□□□□□ -2.21
NEDD4P46934 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.23□□□□□ -2.21
NEDD4P46934 MIR96-201ENST00000362288 78 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 snoU2_19.2-201ENST00000363024 80 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 SNORD68-201ENST00000363214 84 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 U8.7-201ENST00000364940 136 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 MIR653-201ENST00000385279 96 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms