Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MTND5P26-201ENST00000426018 1752 ntBASIC-0.16□□□□□ -2.43
RPL28P46779 SNORA36.1-201ENST00000363424 132 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 SNORD114-26-201ENST00000363543 72 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.16□□□□□ -2.44
RPL28P46779 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.16□□□□□ -2.44
RPL28P46779 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.16□□□□□ -2.44
RPL28P46779 SNORD5.1-201ENST00000458800 75 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 RNU7-87P-201ENST00000459343 62 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 AC145350.1-201ENST00000567426 208 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.16□□□□□ -2.44
RPL28P46779 AC087685.1-201ENST00000587507 141 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 AC119751.7-201ENST00000600494 245 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 AC005014.2-201ENST00000607795 599 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 AC124864.2-201ENST00000624736 186 ntBASIC-0.16□□□□□ -2.44
RPL28P46779 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.17□□□□□ -2.44
RPL28P46779 SNORA9.1-201ENST00000362412 131 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 RNU6-442P-201ENST00000383968 104 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 RNU6-700P-201ENST00000391043 107 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 SNORD12B-201ENST00000410433 91 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 RNA5SP127-201ENST00000411051 133 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 RNU7-62P-201ENST00000458856 62 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 RNU7-102P-201ENST00000458948 62 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 SNORA18.4-201ENST00000516440 124 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 RNU7-181P-201ENST00000517234 74 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.17□□□□□ -2.44
RPL28P46779 AC141557.1-201ENST00000540982 400 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.17□□□□□ -2.44
RPL28P46779 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.17□□□□□ -2.44
RPL28P46779 MIR4305-201ENST00000583252 102 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 MIR3942-201ENST00000585264 109 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 AC018638.8-201ENST00000588755 281 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 AC121247.2-201ENST00000604776 136 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 uc_338.6-201ENST00000613544 171 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 MIR6755-201ENST00000619993 66 ntBASIC-0.17□□□□□ -2.44
RPL28P46779 RNU6-451P-201ENST00000362921 107 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-324P-201ENST00000363957 106 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-268P-201ENST00000364174 107 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 SNORA63C-201ENST00000364578 129 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 SNORA1.2-201ENST00000365189 134 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 MIR125B2-201ENST00000385128 89 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-747P-201ENST00000390928 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-241P-201ENST00000391148 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 PCNPP3-201ENST00000393579 471 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-447P-201ENST00000410293 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-355P-201ENST00000410427 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-791P-201ENST00000410467 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-705P-201ENST00000410601 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-860P-201ENST00000410860 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-847P-201ENST00000411115 108 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU6-785P-201ENST00000411324 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 AC090844.1-201ENST00000422019 156 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.18□□□□□ -2.44
RPL28P46779 MIR18B-201ENST00000454574 71 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RPL23AP54-201ENST00000495129 419 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 AC091959.1-201ENST00000495857 238 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 AC019235.1-201ENST00000503847 207 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.18□□□□□ -2.44
RPL28P46779 AC011352.1-201ENST00000512300 793 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.18□□□□□ -2.44
RPL28P46779 SCARNA8-201ENST00000515924 131 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNA5SP480-201ENST00000516840 109 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNA5SP330-201ENST00000517096 96 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 RNU1-54P-201ENST00000517181 120 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 AC055872.1-201ENST00000570978 278 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.18□□□□□ -2.44
RPL28P46779 SNORD92-201ENST00000585078 85 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 NBR2-204ENST00000587322 63 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 AC006380.1-201ENST00000603598 186 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 U6.90-201ENST00000614007 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 U6.70-201ENST00000620287 104 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.18□□□□□ -2.44
RPL28P46779 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.19□□□□□ -2.44
RPL28P46779 RNU6-483P-201ENST00000384088 108 ntBASIC-0.19□□□□□ -2.44
RPL28P46779 RNU6-364P-201ENST00000384387 107 ntBASIC-0.19□□□□□ -2.44
RPL28P46779 RNU6-332P-201ENST00000391193 108 ntBASIC-0.19□□□□□ -2.44
RPL28P46779 DEFB108C-201ENST00000400154 252 ntBASIC-0.19□□□□□ -2.44
RPL28P46779 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPL28P46779 MTND3P21-201ENST00000433774 331 ntBASIC-0.19□□□□□ -2.44
RPL28P46779 CHEK2P4-201ENST00000450340 246 ntBASIC-0.19□□□□□ -2.44
RPL28P46779 RPL17P19-201ENST00000489069 552 ntBASIC-0.19□□□□□ -2.44
RPL28P46779 RNU6-408P-201ENST00000515910 100 ntBASIC-0.19□□□□□ -2.44
RPL28P46779 MIR3908-201ENST00000579798 126 ntBASIC-0.19□□□□□ -2.44
RPL28P46779 AL391262.2-201ENST00000622466 494 ntBASIC-0.19□□□□□ -2.44
RPL28P46779 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.2□□□□□ -2.44
RPL28P46779 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.2□□□□□ -2.44
RPL28P46779 SNORA72.1-201ENST00000363485 129 ntBASIC-0.2□□□□□ -2.44
RPL28P46779 RNY3P3-201ENST00000363816 102 ntBASIC-0.2□□□□□ -2.44
RPL28P46779 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms