Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNU6-548P-201ENST00000517083 115 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.74□□□□□ -2.13
PTPN9P43378 CBX3P4-201ENST00000538909 354 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 MIR3683-201ENST00000580847 82 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 MIR2681-201ENST00000581814 105 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 MIR4762-201ENST00000585261 75 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 AC242852.1-201ENST00000612151 96 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 AC073349.3-201ENST00000617616 186 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 AL513423.1-201ENST00000621695 132 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 AC244015.1-201ENST00000622301 99 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 RNU6-1123P-201ENST00000362347 106 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 RNU6-1205P-201ENST00000363625 106 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 Y_RNA.203-201ENST00000364106 102 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 RNU6-969P-201ENST00000383900 105 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 RNU6-211P-201ENST00000384047 107 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 Y_RNA.447-201ENST00000384184 113 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 SNORA12.1-201ENST00000390873 148 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 MTCO2P33-201ENST00000402100 465 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 Y_RNA.590-201ENST00000410140 107 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 AL161935.2-201ENST00000414627 60 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 AL591806.2-201ENST00000433122 173 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 AC099513.1-201ENST00000490423 301 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 MTND1P19-201ENST00000511780 315 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 MIR3198-2-201ENST00000577868 80 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 AP000942.4-201ENST00000604811 241 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 MIR8081-201ENST00000611533 95 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 AC021506.2-201ENST00000612354 169 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 MIR8074-201ENST00000615081 81 ntBASIC1.73□□□□□ -2.13
PTPN9P43378 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
PTPN9P43378 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.72□□□□□ -2.13
PTPN9P43378 Y_RNA.122-201ENST00000363331 96 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 Y_RNA.253-201ENST00000364562 112 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 Y_RNA.307-201ENST00000365022 117 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 RNU6-1080P-201ENST00000383982 107 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 MIR194-1-201ENST00000384892 85 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 MIR526A2-201ENST00000390198 65 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.72□□□□□ -2.13
PTPN9P43378 CYCSP49-201ENST00000420810 319 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 STAG3L5P-204ENST00000443759 179 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 snoU13.23-201ENST00000458863 104 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 HMGN1P7-201ENST00000491722 313 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 MIR502-201ENST00000606349 86 ntBASIC1.72□□□□□ -2.13
PTPN9P43378 AC134026.1-201ENST00000623249 2239 ntBASIC1.71□□□□□ -2.14
PTPN9P43378 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
PTPN9P43378 Y_RNA.117-201ENST00000363294 101 ntBASIC1.71□□□□□ -2.14
PTPN9P43378 MIR30A-201ENST00000385092 71 ntBASIC1.71□□□□□ -2.14
PTPN9P43378 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PTPN9P43378 MIR1267-201ENST00000408723 78 ntBASIC1.71□□□□□ -2.14
PTPN9P43378 Y_RNA.621-201ENST00000411065 96 ntBASIC1.71□□□□□ -2.14
PTPN9P43378 SNORA25.15-201ENST00000516487 89 ntBASIC1.71□□□□□ -2.14
PTPN9P43378 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.71□□□□□ -2.14
PTPN9P43378 MIR3128-201ENST00000581957 66 ntBASIC1.71□□□□□ -2.14
PTPN9P43378 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.71□□□□□ -2.14
PTPN9P43378 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
PTPN9P43378 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
PTPN9P43378 MIR424-201ENST00000362227 98 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 RNU4-41P-201ENST00000364426 143 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 Y_RNA.277-201ENST00000364754 102 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 Y_RNA.304-201ENST00000365011 112 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 RNU6-424P-201ENST00000384367 105 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 Y_RNA.489-201ENST00000384410 101 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 Y_RNA.539-201ENST00000384635 107 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 Z98949.2-201ENST00000440996 144 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 Y_RNA.638-201ENST00000459374 113 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 COX6CP14-201ENST00000469580 174 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 AC008834.1-201ENST00000511612 175 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.7□□□□□ -2.14
PTPN9P43378 Y_RNA.679-201ENST00000516416 91 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 Y_RNA.714-201ENST00000517065 90 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.7□□□□□ -2.14
PTPN9P43378 MIR4643-201ENST00000577473 78 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 AC087685.1-201ENST00000587507 141 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 AL591926.4-201ENST00000616895 298 ntBASIC1.7□□□□□ -2.14
PTPN9P43378 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PTPN9P43378 Y_RNA.54-201ENST00000362766 105 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 Y_RNA.188-201ENST00000363952 111 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 RNY1-201ENST00000364228 113 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 SNORA20.1-201ENST00000364790 130 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.69□□□□□ -2.14
PTPN9P43378 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.69□□□□□ -2.14
PTPN9P43378 AC108210.2-201ENST00000503681 201 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 RNU4-71P-201ENST00000516258 113 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 Y_RNA.680-201ENST00000516441 93 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 SNORA77B-201ENST00000578179 125 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 AL442067.1-201ENST00000613261 223 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 AC027279.3-201ENST00000625055 122 ntBASIC1.69□□□□□ -2.14
PTPN9P43378 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PTPN9P43378 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PTPN9P43378 MIRLET7C-201ENST00000362160 84 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 Y_RNA.60-201ENST00000362831 98 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 Y_RNA.796-201ENST00000364268 102 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 Y_RNA.799-201ENST00000364992 102 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 RNU6-439P-201ENST00000384188 106 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 SNORA8.3-201ENST00000384679 139 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 MIR522-201ENST00000385071 87 ntBASIC1.68□□□□□ -2.14
PTPN9P43378 MIR660-201ENST00000385235 97 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 881.9 ms