Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC006386.2-201ENST00000624491 75 ntBASIC2.73□□□□□ -1.97
CCNFP41002 AC012005.1-201ENST00000624575 75 ntBASIC2.73□□□□□ -1.97
CCNFP41002 AL137790.1-201ENST00000634283 177 ntBASIC2.73□□□□□ -1.97
CCNFP41002 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCNFP41002 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.73□□□□□ -1.97
CCNFP41002 RNA5SP205-201ENST00000364653 136 ntBASIC2.72□□□□□ -1.97
CCNFP41002 MIR522-201ENST00000385071 87 ntBASIC2.72□□□□□ -1.97
CCNFP41002 AL606517.2-201ENST00000442855 241 ntBASIC2.72□□□□□ -1.97
CCNFP41002 RN7SL429P-201ENST00000479090 223 ntBASIC2.72□□□□□ -1.97
CCNFP41002 RN7SL489P-201ENST00000486185 223 ntBASIC2.72□□□□□ -1.97
CCNFP41002 RN7SL327P-201ENST00000488659 223 ntBASIC2.72□□□□□ -1.97
CCNFP41002 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCNFP41002 Y_RNA.692-201ENST00000516627 105 ntBASIC2.72□□□□□ -1.97
CCNFP41002 AC007751.1-201ENST00000529260 376 ntBASIC2.72□□□□□ -1.97
CCNFP41002 RN7SL853P-201ENST00000617250 223 ntBASIC2.72□□□□□ -1.97
CCNFP41002 CTSLP2-204ENST00000629029 392 ntBASIC2.72□□□□□ -1.97
CCNFP41002 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CCNFP41002 Y_RNA.66-201ENST00000362862 102 ntBASIC2.71□□□□□ -1.98
CCNFP41002 SNORA80A-201ENST00000363922 136 ntBASIC2.71□□□□□ -1.98
CCNFP41002 SNORD50B-201ENST00000364995 70 ntBASIC2.71□□□□□ -1.98
CCNFP41002 SNORA1-201ENST00000384107 130 ntBASIC2.71□□□□□ -1.98
CCNFP41002 SNORD61-201ENST00000384252 73 ntBASIC2.71□□□□□ -1.98
CCNFP41002 Y_RNA.525-201ENST00000384570 113 ntBASIC2.71□□□□□ -1.98
CCNFP41002 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCNFP41002 RNA5SP127-201ENST00000411051 133 ntBASIC2.71□□□□□ -1.98
CCNFP41002 AC087499.2-201ENST00000432861 149 ntBASIC2.71□□□□□ -1.98
CCNFP41002 AC107083.1-201ENST00000439643 279 ntBASIC2.71□□□□□ -1.98
CCNFP41002 AL135938.1-201ENST00000443141 297 ntBASIC2.71□□□□□ -1.98
CCNFP41002 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.71□□□□□ -1.98
CCNFP41002 RNU7-107P-201ENST00000459121 61 ntBASIC2.71□□□□□ -1.98
CCNFP41002 RNU6-693P-201ENST00000516134 107 ntBASIC2.71□□□□□ -1.98
CCNFP41002 RNA5SP367-201ENST00000516557 118 ntBASIC2.71□□□□□ -1.98
CCNFP41002 MIR5094-201ENST00000578766 85 ntBASIC2.71□□□□□ -1.98
CCNFP41002 AC005786.1-201ENST00000588553 154 ntBASIC2.71□□□□□ -1.98
CCNFP41002 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
CCNFP41002 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCNFP41002 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.7□□□□□ -1.98
CCNFP41002 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CCNFP41002 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CCNFP41002 Y_RNA.120-201ENST00000363304 110 ntBASIC2.7□□□□□ -1.98
CCNFP41002 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.7□□□□□ -1.98
CCNFP41002 Y_RNA.690-201ENST00000516603 95 ntBASIC2.7□□□□□ -1.98
CCNFP41002 SNORA31.15-201ENST00000516771 132 ntBASIC2.7□□□□□ -1.98
CCNFP41002 RPL12P50-201ENST00000603116 116 ntBASIC2.7□□□□□ -1.98
CCNFP41002 AC022513.1-201ENST00000624512 117 ntBASIC2.7□□□□□ -1.98
CCNFP41002 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.7□□□□□ -1.98
CCNFP41002 FO624990.1-201ENST00000636373 85 ntBASIC2.7□□□□□ -1.98
CCNFP41002 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCNFP41002 SNORD14E-201ENST00000364009 85 ntBASIC2.69□□□□□ -1.98
CCNFP41002 RNU1-52P-201ENST00000384190 164 ntBASIC2.69□□□□□ -1.98
CCNFP41002 HMGN2P39-201ENST00000398005 273 ntBASIC2.69□□□□□ -1.98
CCNFP41002 RNA5SP270-201ENST00000411361 118 ntBASIC2.69□□□□□ -1.98
CCNFP41002 Y_RNA.629-201ENST00000411368 105 ntBASIC2.69□□□□□ -1.98
CCNFP41002 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.69□□□□□ -1.98
CCNFP41002 FTH1P12-201ENST00000432137 551 ntBASIC2.69□□□□□ -1.98
CCNFP41002 STAG3L5P-204ENST00000443759 179 ntBASIC2.69□□□□□ -1.98
CCNFP41002 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.69□□□□□ -1.98
CCNFP41002 ELOCP29-201ENST00000588193 334 ntBASIC2.69□□□□□ -1.98
CCNFP41002 AC006023.1-201ENST00000603944 259 ntBASIC2.69□□□□□ -1.98
CCNFP41002 AC069114.2-201ENST00000604699 304 ntBASIC2.69□□□□□ -1.98
CCNFP41002 AL136360.1-201ENST00000503377 1900 ntBASIC2.69□□□□□ -1.98
CCNFP41002 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCNFP41002 SNORA5B-201ENST00000363786 132 ntBASIC2.68□□□□□ -1.98
CCNFP41002 DEFA7P-201ENST00000382676 285 ntBASIC2.68□□□□□ -1.98
CCNFP41002 RNU6-301P-201ENST00000384277 107 ntBASIC2.68□□□□□ -1.98
CCNFP41002 MIR518A2-201ENST00000384966 87 ntBASIC2.68□□□□□ -1.98
CCNFP41002 MIR9-1-201ENST00000385198 89 ntBASIC2.68□□□□□ -1.98
CCNFP41002 AL138827.1-201ENST00000402666 306 ntBASIC2.68□□□□□ -1.98
CCNFP41002 RNA5SP21-201ENST00000410917 96 ntBASIC2.68□□□□□ -1.98
CCNFP41002 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.68□□□□□ -1.98
CCNFP41002 AC084364.2-201ENST00000546924 395 ntBASIC2.68□□□□□ -1.98
CCNFP41002 AC090049.2-201ENST00000550377 109 ntBASIC2.68□□□□□ -1.98
CCNFP41002 AC091544.4-201ENST00000555268 342 ntBASIC2.68□□□□□ -1.98
CCNFP41002 AC087685.1-201ENST00000587507 141 ntBASIC2.68□□□□□ -1.98
CCNFP41002 SNORD14A-201ENST00000606526 91 ntBASIC2.68□□□□□ -1.98
CCNFP41002 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CCNFP41002 Y_RNA.52-201ENST00000362760 96 ntBASIC2.67□□□□□ -1.98
CCNFP41002 RNU6-508P-201ENST00000363231 103 ntBASIC2.67□□□□□ -1.98
CCNFP41002 Y_RNA.242-201ENST00000364473 110 ntBASIC2.67□□□□□ -1.98
CCNFP41002 RNA5SP465-201ENST00000391195 109 ntBASIC2.67□□□□□ -1.98
CCNFP41002 AC007064.1-201ENST00000412238 351 ntBASIC2.67□□□□□ -1.98
CCNFP41002 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.67□□□□□ -1.98
CCNFP41002 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.67□□□□□ -1.98
CCNFP41002 AC105272.1-201ENST00000438604 198 ntBASIC2.67□□□□□ -1.98
CCNFP41002 SNRPGP13-201ENST00000442212 177 ntBASIC2.67□□□□□ -1.98
CCNFP41002 AL365205.2-201ENST00000594586 68 ntBASIC2.67□□□□□ -1.98
CCNFP41002 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCNFP41002 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCNFP41002 snoU2-30.1-201ENST00000365012 70 ntBASIC2.66□□□□□ -1.98
CCNFP41002 RNU6-442P-201ENST00000383968 104 ntBASIC2.66□□□□□ -1.98
CCNFP41002 SNORD20-201ENST00000384550 80 ntBASIC2.66□□□□□ -1.98
CCNFP41002 MIR624-201ENST00000385217 97 ntBASIC2.66□□□□□ -1.98
CCNFP41002 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCNFP41002 RNU6-440P-201ENST00000390882 105 ntBASIC2.66□□□□□ -1.98
CCNFP41002 RN7SKP179-201ENST00000516126 217 ntBASIC2.66□□□□□ -1.98
CCNFP41002 RNU6-659P-201ENST00000516454 104 ntBASIC2.66□□□□□ -1.98
CCNFP41002 AC133485.4-201ENST00000561835 220 ntBASIC2.66□□□□□ -1.98
CCNFP41002 AC138907.4-201ENST00000570107 226 ntBASIC2.66□□□□□ -1.98
CCNFP41002 MIR4446-201ENST00000578505 67 ntBASIC2.66□□□□□ -1.98
CCNFP41002 MIR4672-201ENST00000583126 81 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms