Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 uc_338.17-201ENST00000619633 179 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.39□□□□□ -2.35
BRCA1P38398 MIR6079-201ENST00000635807 62 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
BRCA1P38398 RNU6-767P-201ENST00000384132 107 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 RNU6-306P-201ENST00000384617 107 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 Y_RNA.577-201ENST00000384794 101 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 SNORD41-201ENST00000386967 70 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 MT-TN-201ENST00000387400 73 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 MIR190B-201ENST00000401119 79 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 Y_RNA.594-201ENST00000410373 140 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 MRPS18CP6-201ENST00000423587 223 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 RPL7P42-201ENST00000481005 679 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 RNU7-41P-201ENST00000515917 61 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 AC005972.2-201ENST00000604690 348 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
BRCA1P38398 RNU6-1335P-201ENST00000365426 107 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 RNU6-1297P-201ENST00000384415 104 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 RNU6-1215P-201ENST00000384441 102 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 Y_RNA.537-201ENST00000384626 109 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 RNU6-307P-201ENST00000516743 106 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 RNU2-12P-201ENST00000517216 168 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 AC018638.8-201ENST00000588755 281 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 AL136317.1-201ENST00000612653 226 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 MIR1244-1-201ENST00000612829 85 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 AL627230.5-201ENST00000619807 58 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 MIR1244-3-201ENST00000635744 85 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 MIR1244-2-201ENST00000636449 85 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 MIR1244-4-202ENST00000636813 85 ntBASIC0.38□□□□□ -2.35
BRCA1P38398 SNORD115-30-201ENST00000364117 82 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 Y_RNA.476-201ENST00000384347 108 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.37□□□□□ -2.35
BRCA1P38398 MTND1P4-201ENST00000435196 415 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 MTATP6P26-201ENST00000445926 662 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 SNORA25.10-201ENST00000515926 124 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 MIR4790-201ENST00000577799 79 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 MIR5188-201ENST00000583467 113 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 POLR3GP1-201ENST00000594073 261 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 AC087588.2-201ENST00000617667 426 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 RNU6-710P-201ENST00000410424 105 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 MTND3P8-201ENST00000412909 339 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.37□□□□□ -2.35
BRCA1P38398 RNU6-720P-201ENST00000516363 108 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 RNU6-1007P-201ENST00000516586 107 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 RNU6-1016P-201ENST00000516689 94 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 AL355375.2-201ENST00000574825 175 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 AC048344.4-201ENST00000619744 527 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 AL008636.1-201ENST00000625038 1018 ntBASIC0.37□□□□□ -2.35
BRCA1P38398 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
BRCA1P38398 RNU6-874P-201ENST00000362390 105 ntBASIC0.36□□□□□ -2.35
BRCA1P38398 RNU6-845P-201ENST00000362578 103 ntBASIC0.36□□□□□ -2.35
BRCA1P38398 RNU6-1188P-201ENST00000363795 107 ntBASIC0.36□□□□□ -2.35
BRCA1P38398 Y_RNA.559-201ENST00000384686 107 ntBASIC0.36□□□□□ -2.35
BRCA1P38398 MIR1302-7-201ENST00000408841 72 ntBASIC0.36□□□□□ -2.35
BRCA1P38398 RNU4-57P-201ENST00000515980 135 ntBASIC0.36□□□□□ -2.35
BRCA1P38398 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
BRCA1P38398 MIR1-1-201ENST00000362147 71 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 Y_RNA.242-201ENST00000364473 110 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 SNORD50B-201ENST00000364995 70 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 Y_RNA.368-201ENST00000365547 113 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 SNORA2A-201ENST00000383885 135 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 MTND4P28-201ENST00000426217 387 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 MTCO2P12-201ENST00000427426 682 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 ELOCP24-201ENST00000456370 334 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 AC011195.1-201ENST00000578177 177 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 AC125232.2-201ENST00000592457 143 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 AC022441.3-201ENST00000605737 136 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 AC100810.6-201ENST00000638068 285 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 Y_RNA.318-201ENST00000365131 97 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 RNU6-1304P-201ENST00000411374 106 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 AC023827.1-201ENST00000569247 97 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 uc_338.22-201ENST00000622722 187 ntBASIC0.35□□□□□ -2.35
BRCA1P38398 Y_RNA.172-201ENST00000363765 102 ntBASIC0.34□□□□□ -2.36
BRCA1P38398 AL031003.1-201ENST00000404229 172 ntBASIC0.34□□□□□ -2.36
BRCA1P38398 AC107399.1-201ENST00000451226 265 ntBASIC0.34□□□□□ -2.36
BRCA1P38398 CYCTP-201ENST00000504253 315 ntBASIC0.34□□□□□ -2.36
BRCA1P38398 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.34□□□□□ -2.36
BRCA1P38398 RNU6-408P-201ENST00000515910 100 ntBASIC0.34□□□□□ -2.36
BRCA1P38398 RNU6-1012P-201ENST00000516606 109 ntBASIC0.34□□□□□ -2.36
BRCA1P38398 AC006600.1-201ENST00000572529 153 ntBASIC0.34□□□□□ -2.36
BRCA1P38398 EIF1P4-201ENST00000572664 335 ntBASIC0.34□□□□□ -2.36
BRCA1P38398 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
BRCA1P38398 LARP7P1-201ENST00000605576 316 ntBASIC0.34□□□□□ -2.36
BRCA1P38398 AC073869.6-201ENST00000640656 341 ntBASIC0.34□□□□□ -2.36
BRCA1P38398 RNU6-879P-201ENST00000364328 108 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
BRCA1P38398 AL022718.1-201ENST00000412004 84 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 AL390729.2-201ENST00000416137 156 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 RPL23AP54-201ENST00000495129 419 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.33□□□□□ -2.36
BRCA1P38398 AC116353.2-201ENST00000505332 712 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 SCARNA8-201ENST00000515924 131 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 RNU6-977P-201ENST00000516411 103 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 AC080013.6-201ENST00000606185 215 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 JPX_2.1-201ENST00000614161 69 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 Y_RNA.101-201ENST00000363154 102 ntBASIC0.33□□□□□ -2.36
BRCA1P38398 Y_RNA.253-201ENST00000364562 112 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms