Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RNU6-876P-201ENST00000391295 104 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 PDCL2P1-201ENST00000419302 352 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 U8.19-201ENST00000459095 133 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 RNU6-470P-201ENST00000515954 104 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 AP003484.1-201ENST00000530974 250 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 MIR5000-201ENST00000577717 103 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 AC022709.1-201ENST00000615967 87 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 Y_RNA.166-201ENST00000363730 102 ntBASIC0.57□□□□□ -2.32
FDFT1P37268 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.57□□□□□ -2.32
FDFT1P37268 AC067940.1-201ENST00000458411 300 ntBASIC0.57□□□□□ -2.32
FDFT1P37268 U7.7-201ENST00000459276 60 ntBASIC0.57□□□□□ -2.32
FDFT1P37268 RN7SKP164-201ENST00000516138 266 ntBASIC0.57□□□□□ -2.32
FDFT1P37268 RNU6-966P-201ENST00000516479 104 ntBASIC0.57□□□□□ -2.32
FDFT1P37268 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
FDFT1P37268 U2.1-201ENST00000618978 145 ntBASIC0.57□□□□□ -2.32
FDFT1P37268 Y_RNA.146-201ENST00000363549 102 ntBASIC0.56□□□□□ -2.32
FDFT1P37268 Y_RNA.329-201ENST00000365209 107 ntBASIC0.56□□□□□ -2.32
FDFT1P37268 RNU6-192P-201ENST00000391253 100 ntBASIC0.56□□□□□ -2.32
FDFT1P37268 SNORD99-201ENST00000408612 74 ntBASIC0.56□□□□□ -2.32
FDFT1P37268 RNU6-855P-201ENST00000410395 104 ntBASIC0.56□□□□□ -2.32
FDFT1P37268 RNU6-994P-201ENST00000410507 111 ntBASIC0.56□□□□□ -2.32
FDFT1P37268 MTND1P2-201ENST00000430604 821 ntBASIC0.56□□□□□ -2.32
FDFT1P37268 FGF7P6-202ENST00000451282 293 ntBASIC0.56□□□□□ -2.32
FDFT1P37268 AC093027.1-201ENST00000546698 429 ntBASIC0.56□□□□□ -2.32
FDFT1P37268 RNU6-94P-201ENST00000607728 107 ntBASIC0.56□□□□□ -2.32
FDFT1P37268 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
FDFT1P37268 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
FDFT1P37268 Y_RNA.230-201ENST00000364348 109 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 SNORD81.2-201ENST00000365153 76 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 Y_RNA.368-201ENST00000365547 113 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 MIR489-201ENST00000384923 84 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 MT-TL1-201ENST00000386347 75 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 MTCO3P10-201ENST00000455912 772 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 Y_RNA.653-201ENST00000459091 95 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 MTND4LP26-201ENST00000518144 282 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 MIR4714-201ENST00000580728 77 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 AC022441.3-201ENST00000605737 136 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 MIR7111-201ENST00000619751 72 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 MIR6515-201ENST00000619843 57 ntBASIC0.55□□□□□ -2.32
FDFT1P37268 Y_RNA.148-201ENST00000363557 117 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 SNORD14E-201ENST00000364009 85 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 Y_RNA.354-201ENST00000365448 111 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 RNU6-708P-201ENST00000384217 107 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 RNU6-710P-201ENST00000410424 105 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 Y_RNA.599-201ENST00000410489 109 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 MCFD2P1-201ENST00000417812 300 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 AC096644.2-201ENST00000429278 159 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.54□□□□□ -2.32
FDFT1P37268 RNU6-559P-201ENST00000516151 98 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 RN7SKP295-201ENST00000517264 153 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 AC036111.3-201ENST00000526389 112 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 MIR4251-201ENST00000635819 61 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 U6.92-201ENST00000636464 89 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 AC134026.1-201ENST00000623249 2239 ntBASIC0.54□□□□□ -2.32
FDFT1P37268 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
FDFT1P37268 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
FDFT1P37268 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.32
FDFT1P37268 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
FDFT1P37268 RNY1-201ENST00000364228 113 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 RNU1-133P-201ENST00000364867 167 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 RNU6-1175P-201ENST00000365200 107 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 Y_RNA.341-201ENST00000365341 102 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 SNORD111-201ENST00000408139 94 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 RNU6-1110P-201ENST00000516462 101 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 RNU11-2P-201ENST00000516898 142 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 POLR3GP1-201ENST00000594073 261 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 AL136317.1-201ENST00000612653 226 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 AC133104.2-201ENST00000615272 193 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 AC008133.2-201ENST00000624540 351 ntBASIC0.53□□□□□ -2.32
FDFT1P37268 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.53□□□□□ -2.32
FDFT1P37268 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
FDFT1P37268 Y_RNA.27-201ENST00000362540 103 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 RNU6-1323P-201ENST00000384025 107 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 SNORD38C-201ENST00000384381 69 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 AC005042.3-201ENST00000453230 174 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 AC113139.1-201ENST00000605049 239 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 JPX_2.1-201ENST00000614161 69 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 U6atac.1-201ENST00000616025 117 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 AL442644.1-201ENST00000454390 3105 ntBASIC0.52□□□□□ -2.33
FDFT1P37268 RNU6-490P-201ENST00000362985 107 ntBASIC0.51□□□□□ -2.33
FDFT1P37268 RNU6-654P-201ENST00000364373 107 ntBASIC0.51□□□□□ -2.33
FDFT1P37268 SNORD113.3-201ENST00000364630 78 ntBASIC0.51□□□□□ -2.33
FDFT1P37268 SNORA2B-201ENST00000384583 137 ntBASIC0.51□□□□□ -2.33
FDFT1P37268 MIR802-201ENST00000390235 94 ntBASIC0.51□□□□□ -2.33
FDFT1P37268 AC005534.2-201ENST00000431047 433 ntBASIC0.51□□□□□ -2.33
FDFT1P37268 AC099799.1-201ENST00000439809 192 ntBASIC0.51□□□□□ -2.33
FDFT1P37268 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.51□□□□□ -2.33
FDFT1P37268 RNU6-911P-201ENST00000516523 104 ntBASIC0.51□□□□□ -2.33
FDFT1P37268 RNU7-116P-201ENST00000516940 62 ntBASIC0.51□□□□□ -2.33
FDFT1P37268 MIR4300-201ENST00000581016 96 ntBASIC0.51□□□□□ -2.33
FDFT1P37268 MIR548AR-201ENST00000582191 57 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms