Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC087685.1-201ENST00000587507 141 ntBASIC1.26□□□□□ -2.21
HOXD13P35453 C8orf59P2-201ENST00000603441 271 ntBASIC1.26□□□□□ -2.21
HOXD13P35453 snoU13.31-201ENST00000607291 104 ntBASIC1.26□□□□□ -2.21
HOXD13P35453 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.26□□□□□ -2.21
HOXD13P35453 Y_RNA.203-201ENST00000364106 102 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 Y_RNA.813-201ENST00000364639 102 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 MIR802-201ENST00000390235 94 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 AL590004.1-201ENST00000405321 300 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 AC048334.1-201ENST00000477975 159 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 SNORD111.1-201ENST00000516421 86 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 RNU6-1007P-201ENST00000516586 107 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 AC024405.2-202ENST00000532731 184 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 MIR548AY-201ENST00000617669 107 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 AC027335.2-201ENST00000624030 375 ntBASIC1.25□□□□□ -2.21
HOXD13P35453 AL391987.6-201ENST00000305671 199 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 Y_RNA.183-201ENST00000363882 113 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 SNORD14E-201ENST00000364009 85 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 AC117470.1-201ENST00000381974 330 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.24□□□□□ -2.21
HOXD13P35453 Y_RNA.631-201ENST00000459607 101 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 AC117454.1-201ENST00000491120 168 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 SNORD116-28-201ENST00000516123 91 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 RNU7-115P-201ENST00000516433 55 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 Y_RNA.715-201ENST00000517082 110 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 AC136628.3-201ENST00000521868 290 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 AC127455.1-201ENST00000565496 145 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 MIR376A1-201ENST00000616574 68 ntBASIC1.24□□□□□ -2.21
HOXD13P35453 Y_RNA.128-201ENST00000363391 112 ntBASIC1.23□□□□□ -2.21
HOXD13P35453 Y_RNA.242-201ENST00000364473 110 ntBASIC1.23□□□□□ -2.21
HOXD13P35453 Y_RNA.389-201ENST00000383924 113 ntBASIC1.23□□□□□ -2.21
HOXD13P35453 SNORA80D-201ENST00000384488 135 ntBASIC1.23□□□□□ -2.21
HOXD13P35453 RNU6-308P-201ENST00000390957 107 ntBASIC1.23□□□□□ -2.21
HOXD13P35453 RNU6-130P-201ENST00000411112 103 ntBASIC1.23□□□□□ -2.21
HOXD13P35453 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
HOXD13P35453 MIR4498-201ENST00000577599 66 ntBASIC1.23□□□□□ -2.21
HOXD13P35453 MIR3145-201ENST00000580727 82 ntBASIC1.23□□□□□ -2.21
HOXD13P35453 PART1_1.1-201ENST00000611761 217 ntBASIC1.23□□□□□ -2.21
HOXD13P35453 U8.7-201ENST00000364940 136 ntBASIC1.22□□□□□ -2.21
HOXD13P35453 Y_RNA.380-201ENST00000365663 111 ntBASIC1.22□□□□□ -2.21
HOXD13P35453 MIR1252-201ENST00000408861 65 ntBASIC1.22□□□□□ -2.21
HOXD13P35453 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.22□□□□□ -2.21
HOXD13P35453 Y_RNA.31-201ENST00000362574 102 ntBASIC1.21□□□□□ -2.22
HOXD13P35453 SNORD113-8-201ENST00000363497 74 ntBASIC1.21□□□□□ -2.22
HOXD13P35453 RNU1-124P-201ENST00000363861 145 ntBASIC1.21□□□□□ -2.22
HOXD13P35453 RNU6-823P-201ENST00000391042 103 ntBASIC1.21□□□□□ -2.22
HOXD13P35453 PMCHL1-202ENST00000423102 261 ntBASIC1.21□□□□□ -2.22
HOXD13P35453 AC136932.1-201ENST00000574771 208 ntBASIC1.21□□□□□ -2.22
HOXD13P35453 AC134503.1-201ENST00000633048 54 ntBASIC1.21□□□□□ -2.22
HOXD13P35453 RNU4-90P-201ENST00000362773 141 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 Y_RNA.61-201ENST00000362835 102 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 RNU4-80P-201ENST00000363200 141 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 SNORD50B-201ENST00000364995 70 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 Y_RNA.327-201ENST00000365201 102 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 SNORD38C-201ENST00000384381 69 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 MIR516B2-201ENST00000385190 85 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 AC063976.4-201ENST00000421971 163 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 MTND4LP30-201ENST00000454092 297 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 RNU6-397P-201ENST00000516226 104 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 RNU6-1046P-201ENST00000516538 107 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 SNORA40.15-201ENST00000516884 107 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 SNORA74.3-201ENST00000517108 154 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.2□□□□□ -2.22
HOXD13P35453 AL359821.1-201ENST00000605519 182 ntBASIC1.2□□□□□ -2.22
HOXD13P35453 Y_RNA.148-201ENST00000363557 117 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 MIR520C-201ENST00000385005 87 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 SNORA36B-201ENST00000410438 131 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 Y_RNA.602-201ENST00000410535 92 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 AC245047.8-201ENST00000456455 284 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 RNU6-437P-201ENST00000459408 95 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 SNORD79.1-201ENST00000516069 84 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 RNU6-897P-201ENST00000517135 105 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 AC090142.3-201ENST00000519012 385 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXD13P35453 MIR4300-201ENST00000581016 96 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 AC012676.2-201ENST00000619258 186 ntBASIC1.19□□□□□ -2.22
HOXD13P35453 RNU6-674P-201ENST00000363831 107 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 Y_RNA.222-201ENST00000364264 102 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 Y_RNA.286-201ENST00000364813 102 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 RNU6-442P-201ENST00000383968 104 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 SNORD115-46-201ENST00000390982 71 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 Y_RNA.645-201ENST00000391229 102 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 RNU7-141P-201ENST00000459304 62 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 AC005840.1-201ENST00000498412 377 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 RNU7-43P-201ENST00000516554 64 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.18□□□□□ -2.22
HOXD13P35453 AC104695.3-201ENST00000604052 296 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 AL096861.1-201ENST00000610899 123 ntBASIC1.18□□□□□ -2.22
HOXD13P35453 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HOXD13P35453 Y_RNA.152-201ENST00000363578 100 ntBASIC1.17□□□□□ -2.22
HOXD13P35453 RNU6-1209P-201ENST00000363655 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms