Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 MTCO2P30-201ENST00000503662 364 ntBASIC-0.82□□□□□ -2.54
SDC4P31431 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.82□□□□□ -2.54
SDC4P31431 MTND1P24-201ENST00000552175 861 ntBASIC-0.82□□□□□ -2.54
SDC4P31431 MIR4802-201ENST00000581881 80 ntBASIC-0.82□□□□□ -2.54
SDC4P31431 AC092747.3-201ENST00000603769 301 ntBASIC-0.82□□□□□ -2.54
SDC4P31431 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.82□□□□□ -2.54
SDC4P31431 AP002371.2-201ENST00000624450 503 ntBASIC-0.82□□□□□ -2.54
SDC4P31431 SNORD115-24-201ENST00000363528 82 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 SNORD113-7-201ENST00000363762 77 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 RNA5SP205-201ENST00000364653 136 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 RNU6-291P-201ENST00000384720 107 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 MIR329-1-201ENST00000385028 80 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 SNORD12C-201ENST00000386307 89 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 RNU6-913P-201ENST00000390913 95 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.83□□□□□ -2.54
SDC4P31431 AC073415.1-201ENST00000449240 153 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.83□□□□□ -2.54
SDC4P31431 AC134698.4-201ENST00000523451 826 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.83□□□□□ -2.54
SDC4P31431 NAMPTP3-201ENST00000569273 224 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 MIR3682-201ENST00000581338 84 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 AC090616.2-202ENST00000584248 222 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 MIR4436A-201ENST00000585278 85 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 AC125232.2-201ENST00000592457 143 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 MIR6507-201ENST00000613630 70 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 AC023510.2-201ENST00000622162 746 ntBASIC-0.83□□□□□ -2.54
SDC4P31431 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 RNU6-767P-201ENST00000384132 107 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 FCF1P9-201ENST00000412546 282 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.84□□□□□ -2.54
SDC4P31431 MTND3P23-201ENST00000431980 347 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 AL356010.1-201ENST00000456364 102 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 MTND5P34-201ENST00000568888 325 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 MIR5706-201ENST00000579841 80 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 AC008536.2-201ENST00000607284 349 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 MIR8055-201ENST00000610739 97 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 AL391099.1-201ENST00000624635 187 ntBASIC-0.84□□□□□ -2.54
SDC4P31431 MIR148A-201ENST00000362215 68 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 SNORD113-6-201ENST00000363345 75 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 SNORA25.7-201ENST00000364375 127 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 RNU6-790P-201ENST00000384479 105 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 SNORA75.1-201ENST00000391130 148 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.85□□□□□ -2.55
SDC4P31431 AC109327.2-201ENST00000448339 378 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 AL138752.1-201ENST00000452964 351 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 AC138749.4-201ENST00000563970 127 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 MIR4263-201ENST00000584745 83 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 AC092807.2-201ENST00000609367 243 ntBASIC-0.85□□□□□ -2.55
SDC4P31431 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.85□□□□□ -2.55
SDC4P31431 MIR410-201ENST00000362222 80 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 SNORD114-7-201ENST00000362520 77 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 RNU6-403P-201ENST00000363163 104 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 SNORA1.2-201ENST00000365189 134 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 RNU6-442P-201ENST00000383968 104 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 SNORA24-201ENST00000384096 131 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 RNU6-214P-201ENST00000384130 107 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 RNU6-297P-201ENST00000384636 107 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 MT-TF-201ENST00000387314 71 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 SNORA40.3-201ENST00000390964 122 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 AL606923.1-201ENST00000406616 190 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 MIR1912-201ENST00000410389 80 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 RNU6-602P-201ENST00000411155 105 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 AC010424.1-201ENST00000506336 297 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 MTND2P31-201ENST00000512602 616 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 RNU6-135P-201ENST00000516769 101 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 RNU6-958P-201ENST00000516995 106 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.86□□□□□ -2.55
SDC4P31431 AL355297.3-201ENST00000604082 446 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 MIR6082-201ENST00000613604 109 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 Z97988.1-201ENST00000637697 135 ntBASIC-0.86□□□□□ -2.55
SDC4P31431 SNORD115-30-201ENST00000364117 82 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 RNU4-84P-201ENST00000364200 139 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 RNU6-996P-201ENST00000365438 107 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 CYCSP46-201ENST00000423569 204 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.87□□□□□ -2.55
SDC4P31431 SNORA19.2-201ENST00000516013 114 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 AP003168.1-201ENST00000530091 307 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.87□□□□□ -2.55
SDC4P31431 MIR5589-201ENST00000579442 60 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 AC245014.2-201ENST00000603689 287 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 AL391834.2-201ENST00000609982 546 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 uc_338.28-201ENST00000612082 187 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms