Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 RNU6-966P-201ENST00000516479 104 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 EIF1P4-201ENST00000572664 335 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 MIR4300-201ENST00000581016 96 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 AC006380.1-201ENST00000603598 186 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 MIR3688-2-201ENST00000636963 87 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 MIR924-201ENST00000638017 53 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
SLC6A1P30531 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
SLC6A1P30531 RNU6-369P-201ENST00000362515 102 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 Y_RNA.88-201ENST00000363029 99 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 Y_RNA.148-201ENST00000363557 117 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 RNU6-99P-201ENST00000364721 107 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 Y_RNA.368-201ENST00000365547 113 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 SNORD115-47-201ENST00000391226 86 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 MTCO2P12-201ENST00000427426 682 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 AC098934.3-201ENST00000430450 190 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 AC005534.2-201ENST00000431047 433 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
SLC6A1P30531 Z83846.1-201ENST00000446798 265 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 CHEK2P4-201ENST00000450340 246 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 RPL30P15-201ENST00000457129 321 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 MIR2053-201ENST00000459295 91 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 RN7SKP12-201ENST00000516275 143 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 MIR2355-201ENST00000517199 87 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 MIR548AR-201ENST00000582191 57 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 AC012433.1-201ENST00000588916 398 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.29□□□□□ -2.36
SLC6A1P30531 AC087588.2-201ENST00000617667 426 ntBASIC0.29□□□□□ -2.36
SLC6A1P30531 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.28□□□□□ -2.36
SLC6A1P30531 Y_RNA.86-201ENST00000363020 111 ntBASIC0.28□□□□□ -2.36
SLC6A1P30531 Y_RNA.453-201ENST00000384223 109 ntBASIC0.28□□□□□ -2.36
SLC6A1P30531 SNORA72-201ENST00000384339 132 ntBASIC0.28□□□□□ -2.36
SLC6A1P30531 RNU6-177P-201ENST00000411257 104 ntBASIC0.28□□□□□ -2.36
SLC6A1P30531 MTND4P28-201ENST00000426217 387 ntBASIC0.28□□□□□ -2.36
SLC6A1P30531 AC107399.1-201ENST00000451226 265 ntBASIC0.28□□□□□ -2.36
SLC6A1P30531 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.28□□□□□ -2.36
SLC6A1P30531 AC005899.2-201ENST00000584353 90 ntBASIC0.28□□□□□ -2.36
SLC6A1P30531 AC005972.2-201ENST00000604690 348 ntBASIC0.28□□□□□ -2.36
SLC6A1P30531 AL355073.2-201ENST00000612106 557 ntBASIC0.28□□□□□ -2.36
SLC6A1P30531 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SLC6A1P30531 MIR1-1-201ENST00000362147 71 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 MIR330-201ENST00000362196 94 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 Y_RNA.3-201ENST00000362331 103 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 Y_RNA.168-201ENST00000363740 102 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 RNU6-324P-201ENST00000363957 106 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 Y_RNA.436-201ENST00000384097 102 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 Y_RNA.482-201ENST00000384377 111 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 MIR570-201ENST00000384917 97 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 MIR140-201ENST00000385282 100 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 RNU6-510P-201ENST00000391239 108 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 Y_RNA.592-201ENST00000410274 109 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 MTND3P8-201ENST00000412909 339 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 MTCO2P27-201ENST00000420740 428 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.27□□□□□ -2.37
SLC6A1P30531 AC116353.2-201ENST00000505332 712 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.27□□□□□ -2.37
SLC6A1P30531 RNU6-436P-201ENST00000516171 114 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 RNU6-155P-201ENST00000516347 100 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 RNU6-720P-201ENST00000516363 108 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 AC090517.2-201ENST00000614966 680 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 U4.5-201ENST00000617137 123 ntBASIC0.27□□□□□ -2.37
SLC6A1P30531 Y_RNA.446-201ENST00000384178 104 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 Y_RNA.516-201ENST00000384541 124 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 MIR573-201ENST00000384964 99 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 SNORA75.4-201ENST00000391278 119 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 AC016907.1-201ENST00000419483 435 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.26□□□□□ -2.37
SLC6A1P30531 FCF1P4-201ENST00000448326 183 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 AC092989.1-201ENST00000481235 277 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 RNU6-120P-201ENST00000516077 103 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 MIR2115-201ENST00000516657 100 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 RNU6-1213P-201ENST00000517075 94 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 AL355375.2-201ENST00000574825 175 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 AC005176.2-201ENST00000596933 147 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 AC104695.3-201ENST00000604052 296 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 PISRT1.1-201ENST00000616930 107 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 MIR6779-201ENST00000617283 64 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 AC091925.1-201ENST00000623204 462 ntBASIC0.26□□□□□ -2.37
SLC6A1P30531 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
SLC6A1P30531 SNORA69.1-201ENST00000390904 137 ntBASIC0.25□□□□□ -2.37
SLC6A1P30531 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.25□□□□□ -2.37
SLC6A1P30531 U8.19-201ENST00000459095 133 ntBASIC0.25□□□□□ -2.37
SLC6A1P30531 snoU13.21-201ENST00000459368 105 ntBASIC0.25□□□□□ -2.37
SLC6A1P30531 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.25□□□□□ -2.37
SLC6A1P30531 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
SLC6A1P30531 RNU6-307P-201ENST00000516743 106 ntBASIC0.25□□□□□ -2.37
SLC6A1P30531 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.25□□□□□ -2.37
SLC6A1P30531 Y_RNA.146-201ENST00000363549 102 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 SNORD14E-201ENST00000364009 85 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 Y_RNA.370-201ENST00000365589 108 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 RNU6-20P-201ENST00000384106 107 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 RNU6-767P-201ENST00000384132 107 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 RNU6-192P-201ENST00000391253 100 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 MIR548F1-201ENST00000408667 84 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 AL589823.1-201ENST00000429577 183 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 SNRPGP14-201ENST00000435400 219 ntBASIC0.24□□□□□ -2.37
SLC6A1P30531 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.24□□□□□ -2.37
SLC6A1P30531 Y_RNA.714-201ENST00000517065 90 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms