Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RNU2-12P-201ENST00000517216 168 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 RNU7-181P-201ENST00000517234 74 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.23□□□□□ -2.45
CD40LGP29965 uc_338.6-201ENST00000613544 171 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 MIR1295B-201ENST00000636144 60 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 AC068137.3-201ENST00000639191 341 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNA5SP117-201ENST00000365294 118 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 SNORD116-11-201ENST00000383882 92 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-318P-201ENST00000384283 103 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-364P-201ENST00000384387 107 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 MIR643-201ENST00000385267 97 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-747P-201ENST00000390928 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-241P-201ENST00000391148 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-447P-201ENST00000410293 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-355P-201ENST00000410427 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-791P-201ENST00000410467 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-705P-201ENST00000410601 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-860P-201ENST00000410860 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-785P-201ENST00000411324 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU7-62P-201ENST00000458856 62 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-415P-201ENST00000516252 97 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 LRRC34P1-201ENST00000542742 915 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.24□□□□□ -2.45
CD40LGP29965 AC133485.4-201ENST00000561835 220 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 MIR4743-201ENST00000584576 69 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 U6.90-201ENST00000614007 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 AC004467.1-201ENST00000615678 330 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 U6.70-201ENST00000620287 104 ntBASIC-0.24□□□□□ -2.45
CD40LGP29965 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 RNU6-187P-201ENST00000384139 106 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 SNORA72-201ENST00000384339 132 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 MIR7-2-201ENST00000384970 110 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 SNRPGP14-201ENST00000435400 219 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 AC069271.1-201ENST00000445577 156 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 U8.19-201ENST00000459095 133 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 RPL17P19-201ENST00000489069 552 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 SNORA18.4-201ENST00000516440 124 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 MTND1P24-201ENST00000552175 861 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.25□□□□□ -2.45
CD40LGP29965 RNA5SP325-201ENST00000363756 130 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 RNA5SP128-201ENST00000365305 116 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 RNU6-514P-201ENST00000384208 107 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 MIR125B2-201ENST00000385128 89 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 AL031003.1-201ENST00000404229 172 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 USP9YP30-201ENST00000430729 455 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 RNU6-956P-201ENST00000458868 103 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 AC091959.1-201ENST00000495857 238 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.26□□□□□ -2.45
CD40LGP29965 MIR5701-3-201ENST00000578890 82 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 MIR5701-1-201ENST00000585138 82 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 AC092447.9-201ENST00000603395 144 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 MIR5701-2-201ENST00000615634 82 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 MIR6863-201ENST00000636112 90 ntBASIC-0.26□□□□□ -2.45
CD40LGP29965 RNU6-874P-201ENST00000362390 105 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 RNU6-161P-201ENST00000363051 106 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 RNU6-842P-201ENST00000384269 107 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 SNORA26-201ENST00000391286 122 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 AC005042.3-201ENST00000453230 174 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 RNU2-13P-201ENST00000515909 113 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 RNU6-848P-201ENST00000515948 107 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 RNU6-617P-201ENST00000516147 107 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 RNU6-473P-201ENST00000516164 107 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 RNU7-156P-201ENST00000517214 74 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.27□□□□□ -2.45
CD40LGP29965 SNORD92-201ENST00000585078 85 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 AC010332.2-201ENST00000613083 1904 ntBASIC-0.27□□□□□ -2.45
CD40LGP29965 SNORA72.1-201ENST00000363485 129 ntBASIC-0.28□□□□□ -2.45
CD40LGP29965 RNU6-324P-201ENST00000363957 106 ntBASIC-0.28□□□□□ -2.45
CD40LGP29965 RNU6-268P-201ENST00000364174 107 ntBASIC-0.28□□□□□ -2.45
CD40LGP29965 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.28□□□□□ -2.45
CD40LGP29965 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.28□□□□□ -2.45
CD40LGP29965 RNU6-442P-201ENST00000383968 104 ntBASIC-0.28□□□□□ -2.45
CD40LGP29965 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.28□□□□□ -2.45
CD40LGP29965 RNU6-855P-201ENST00000410395 104 ntBASIC-0.28□□□□□ -2.45
CD40LGP29965 TRBVB-201ENST00000477100 408 ntBASIC-0.28□□□□□ -2.45
CD40LGP29965 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.28□□□□□ -2.45
CD40LGP29965 AC055872.1-201ENST00000570978 278 ntBASIC-0.28□□□□□ -2.45
CD40LGP29965 RNU1-29P-201ENST00000606574 126 ntBASIC-0.28□□□□□ -2.45
CD40LGP29965 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.29□□□□□ -2.46
CD40LGP29965 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.29□□□□□ -2.46
CD40LGP29965 RNU6-767P-201ENST00000384132 107 ntBASIC-0.29□□□□□ -2.46
CD40LGP29965 RNU2-61P-201ENST00000411069 191 ntBASIC-0.29□□□□□ -2.46
CD40LGP29965 RNU6-847P-201ENST00000411115 108 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms