Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU4-80P-201ENST00000363200 141 ntBASIC1.13□□□□□ -2.23
RPA1P27694 RNU6-801P-201ENST00000364087 105 ntBASIC1.13□□□□□ -2.23
RPA1P27694 Y_RNA.230-201ENST00000364348 109 ntBASIC1.13□□□□□ -2.23
RPA1P27694 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
RPA1P27694 RNU4-76P-201ENST00000364509 141 ntBASIC1.13□□□□□ -2.23
RPA1P27694 Y_RNA.310-201ENST00000365063 113 ntBASIC1.13□□□□□ -2.23
RPA1P27694 RNU6-1227P-201ENST00000383981 107 ntBASIC1.13□□□□□ -2.23
RPA1P27694 Y_RNA.424-201ENST00000384063 103 ntBASIC1.13□□□□□ -2.23
RPA1P27694 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
RPA1P27694 AL162725.1-201ENST00000435405 301 ntBASIC1.13□□□□□ -2.23
RPA1P27694 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.13□□□□□ -2.23
RPA1P27694 RPS20P10-201ENST00000451209 253 ntBASIC1.13□□□□□ -2.23
RPA1P27694 SNORA31.4-201ENST00000516049 129 ntBASIC1.13□□□□□ -2.23
RPA1P27694 RNU6-1096P-201ENST00000517089 102 ntBASIC1.13□□□□□ -2.23
RPA1P27694 RNU6-988P-201ENST00000519081 107 ntBASIC1.13□□□□□ -2.23
RPA1P27694 AC131281.1-201ENST00000522984 164 ntBASIC1.13□□□□□ -2.23
RPA1P27694 Y_RNA.772-201ENST00000606692 102 ntBASIC1.13□□□□□ -2.23
RPA1P27694 BX284668.6-201ENST00000606899 438 ntBASIC1.13□□□□□ -2.23
RPA1P27694 GHRLOS.1-201ENST00000610995 70 ntBASIC1.13□□□□□ -2.23
RPA1P27694 AC012676.2-201ENST00000619258 186 ntBASIC1.13□□□□□ -2.23
RPA1P27694 Y_RNA.158-201ENST00000363651 101 ntBASIC1.12□□□□□ -2.23
RPA1P27694 RNU4-50P-201ENST00000364361 141 ntBASIC1.12□□□□□ -2.23
RPA1P27694 Y_RNA.326-201ENST00000365176 113 ntBASIC1.12□□□□□ -2.23
RPA1P27694 Y_RNA.541-201ENST00000384640 113 ntBASIC1.12□□□□□ -2.23
RPA1P27694 MIR1278-201ENST00000408753 81 ntBASIC1.12□□□□□ -2.23
RPA1P27694 AL049830.1-201ENST00000468034 425 ntBASIC1.12□□□□□ -2.23
RPA1P27694 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
RPA1P27694 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.12□□□□□ -2.23
RPA1P27694 RNU6-496P-201ENST00000516145 99 ntBASIC1.12□□□□□ -2.23
RPA1P27694 RNA5SP168-201ENST00000516642 112 ntBASIC1.12□□□□□ -2.23
RPA1P27694 SNORA70.22-201ENST00000517160 124 ntBASIC1.12□□□□□ -2.23
RPA1P27694 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
RPA1P27694 AC011373.1-201ENST00000607270 237 ntBASIC1.12□□□□□ -2.23
RPA1P27694 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.12□□□□□ -2.23
RPA1P27694 AC068647.2-201ENST00000637380 353 ntBASIC1.12□□□□□ -2.23
RPA1P27694 Y_RNA.383-201ENST00000383855 97 ntBASIC1.11□□□□□ -2.23
RPA1P27694 Y_RNA.455-201ENST00000384230 98 ntBASIC1.11□□□□□ -2.23
RPA1P27694 SNORD63-201ENST00000384262 68 ntBASIC1.11□□□□□ -2.23
RPA1P27694 Y_RNA.462-201ENST00000384268 102 ntBASIC1.11□□□□□ -2.23
RPA1P27694 MIR653-201ENST00000385279 96 ntBASIC1.11□□□□□ -2.23
RPA1P27694 SNORA26.5-201ENST00000391215 123 ntBASIC1.11□□□□□ -2.23
RPA1P27694 RNU6-1054P-201ENST00000411293 104 ntBASIC1.11□□□□□ -2.23
RPA1P27694 SNRPGP10-201ENST00000432323 225 ntBASIC1.11□□□□□ -2.23
RPA1P27694 DYNLT3P2-201ENST00000442517 295 ntBASIC1.11□□□□□ -2.23
RPA1P27694 AC005042.3-201ENST00000453230 174 ntBASIC1.11□□□□□ -2.23
RPA1P27694 AC092991.1-201ENST00000477176 376 ntBASIC1.11□□□□□ -2.23
RPA1P27694 RNU6-322P-201ENST00000516010 103 ntBASIC1.11□□□□□ -2.23
RPA1P27694 RNU6-341P-201ENST00000516973 96 ntBASIC1.11□□□□□ -2.23
RPA1P27694 RNU6-165P-201ENST00000517170 99 ntBASIC1.11□□□□□ -2.23
RPA1P27694 AC022616.4-201ENST00000522985 181 ntBASIC1.11□□□□□ -2.23
RPA1P27694 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
RPA1P27694 MIR4781-201ENST00000585250 76 ntBASIC1.11□□□□□ -2.23
RPA1P27694 AC006380.1-201ENST00000603598 186 ntBASIC1.11□□□□□ -2.23
RPA1P27694 MIR376A1-201ENST00000616574 68 ntBASIC1.11□□□□□ -2.23
RPA1P27694 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.11□□□□□ -2.23
RPA1P27694 AL391516.1-201ENST00000554380 2449 ntBASIC1.11□□□□□ -2.23
RPA1P27694 AC134026.1-201ENST00000623249 2239 ntBASIC1.1□□□□□ -2.23
RPA1P27694 SNORA63C-201ENST00000364578 129 ntBASIC1.1□□□□□ -2.23
RPA1P27694 U8.7-201ENST00000364940 136 ntBASIC1.1□□□□□ -2.23
RPA1P27694 RNU6-424P-201ENST00000384367 105 ntBASIC1.1□□□□□ -2.23
RPA1P27694 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
RPA1P27694 RNU6-985P-201ENST00000410182 104 ntBASIC1.1□□□□□ -2.23
RPA1P27694 RNU6-855P-201ENST00000410395 104 ntBASIC1.1□□□□□ -2.23
RPA1P27694 AC005534.2-201ENST00000431047 433 ntBASIC1.1□□□□□ -2.23
RPA1P27694 HMGN1P10-201ENST00000474557 553 ntBASIC1.1□□□□□ -2.23
RPA1P27694 AC117454.1-201ENST00000491120 168 ntBASIC1.1□□□□□ -2.23
RPA1P27694 MRPS35P2-201ENST00000508242 191 ntBASIC1.1□□□□□ -2.23
RPA1P27694 RNY3P15-201ENST00000516297 97 ntBASIC1.1□□□□□ -2.23
RPA1P27694 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.1□□□□□ -2.23
RPA1P27694 AC090049.2-201ENST00000550377 109 ntBASIC1.1□□□□□ -2.23
RPA1P27694 AL591926.4-201ENST00000616895 298 ntBASIC1.1□□□□□ -2.23
RPA1P27694 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
RPA1P27694 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
RPA1P27694 MIR337-201ENST00000362281 93 ntBASIC1.09□□□□□ -2.23
RPA1P27694 Y_RNA.19-201ENST00000362462 99 ntBASIC1.09□□□□□ -2.23
RPA1P27694 RNU6-199P-201ENST00000362954 107 ntBASIC1.09□□□□□ -2.23
RPA1P27694 Y_RNA.183-201ENST00000363882 113 ntBASIC1.09□□□□□ -2.23
RPA1P27694 MIR526A1-201ENST00000384897 85 ntBASIC1.09□□□□□ -2.23
RPA1P27694 RNU6-101P-201ENST00000410323 104 ntBASIC1.09□□□□□ -2.23
RPA1P27694 PIGPP3-201ENST00000425307 415 ntBASIC1.09□□□□□ -2.23
RPA1P27694 SUMO1P2-201ENST00000452524 304 ntBASIC1.09□□□□□ -2.23
RPA1P27694 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.09□□□□□ -2.23
RPA1P27694 U8.19-201ENST00000459095 133 ntBASIC1.09□□□□□ -2.23
RPA1P27694 RNU6-917P-201ENST00000516294 104 ntBASIC1.09□□□□□ -2.23
RPA1P27694 RNU6-191P-201ENST00000516295 94 ntBASIC1.09□□□□□ -2.23
RPA1P27694 RNU6-764P-201ENST00000516396 105 ntBASIC1.09□□□□□ -2.23
RPA1P27694 AC011604.1-201ENST00000545978 196 ntBASIC1.09□□□□□ -2.23
RPA1P27694 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.09□□□□□ -2.23
RPA1P27694 AL357312.1-201ENST00000603879 298 ntBASIC1.09□□□□□ -2.23
RPA1P27694 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.09□□□□□ -2.23
RPA1P27694 Y_RNA.4-201ENST00000362333 112 ntBASIC1.08□□□□□ -2.24
RPA1P27694 SNORD114-7-201ENST00000362520 77 ntBASIC1.08□□□□□ -2.24
RPA1P27694 RNU6-770P-201ENST00000363929 105 ntBASIC1.08□□□□□ -2.24
RPA1P27694 RNU6-651P-201ENST00000411040 105 ntBASIC1.08□□□□□ -2.24
RPA1P27694 MTCO1P5-201ENST00000433573 344 ntBASIC1.08□□□□□ -2.24
RPA1P27694 snoU13.25-201ENST00000458945 104 ntBASIC1.08□□□□□ -2.24
RPA1P27694 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.08□□□□□ -2.24
RPA1P27694 RNU6-1278P-201ENST00000516130 107 ntBASIC1.08□□□□□ -2.24
RPA1P27694 AL138825.1-201ENST00000618587 192 ntBASIC1.08□□□□□ -2.24
RPA1P27694 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms