Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
CD40P25942 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CD40P25942 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CD40P25942 RNU4-82P-201ENST00000362443 140 ntBASIC2.24□□□□□ -2.05
CD40P25942 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
CD40P25942 RNU6-768P-201ENST00000384683 107 ntBASIC2.24□□□□□ -2.05
CD40P25942 SNORA26-201ENST00000391286 122 ntBASIC2.24□□□□□ -2.05
CD40P25942 RNA5SP481-201ENST00000516814 122 ntBASIC2.24□□□□□ -2.05
CD40P25942 SNORA31.17-201ENST00000516953 127 ntBASIC2.24□□□□□ -2.05
CD40P25942 RNU6-1116P-201ENST00000517269 99 ntBASIC2.24□□□□□ -2.05
CD40P25942 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.24□□□□□ -2.05
CD40P25942 AL160236.1-201ENST00000556317 195 ntBASIC2.24□□□□□ -2.05
CD40P25942 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CD40P25942 SNORD14E-201ENST00000364009 85 ntBASIC2.23□□□□□ -2.05
CD40P25942 snoU2-30.1-201ENST00000365012 70 ntBASIC2.23□□□□□ -2.05
CD40P25942 RNU4-11P-201ENST00000365287 132 ntBASIC2.23□□□□□ -2.05
CD40P25942 RNU6-1031P-201ENST00000384773 107 ntBASIC2.23□□□□□ -2.05
CD40P25942 MIR181B1-201ENST00000385240 110 ntBASIC2.23□□□□□ -2.05
CD40P25942 CALM2P4-201ENST00000430810 426 ntBASIC2.23□□□□□ -2.05
CD40P25942 AL513328.1-201ENST00000446460 224 ntBASIC2.23□□□□□ -2.05
CD40P25942 snoU13.27-201ENST00000459278 104 ntBASIC2.23□□□□□ -2.05
CD40P25942 RNA5SP76-201ENST00000516277 87 ntBASIC2.23□□□□□ -2.05
CD40P25942 SCARNA16.3-201ENST00000516595 184 ntBASIC2.23□□□□□ -2.05
CD40P25942 SNORD45.4-201ENST00000516629 73 ntBASIC2.23□□□□□ -2.05
CD40P25942 RNU6-126P-201ENST00000516685 103 ntBASIC2.23□□□□□ -2.05
CD40P25942 RNU6-365P-201ENST00000517113 106 ntBASIC2.23□□□□□ -2.05
CD40P25942 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.23□□□□□ -2.05
CD40P25942 AC004486.1-201ENST00000546846 233 ntBASIC2.23□□□□□ -2.05
CD40P25942 MIR4709-201ENST00000577272 72 ntBASIC2.23□□□□□ -2.05
CD40P25942 AC097639.2-201ENST00000603159 172 ntBASIC2.23□□□□□ -2.05
CD40P25942 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CD40P25942 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CD40P25942 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CD40P25942 Y_RNA.400-201ENST00000383963 111 ntBASIC2.22□□□□□ -2.05
CD40P25942 RNU6-163P-201ENST00000384396 106 ntBASIC2.22□□□□□ -2.05
CD40P25942 MIR27B-201ENST00000385129 97 ntBASIC2.22□□□□□ -2.05
CD40P25942 SNORD37.2-201ENST00000391075 66 ntBASIC2.22□□□□□ -2.05
CD40P25942 AL590004.2-201ENST00000404787 371 ntBASIC2.22□□□□□ -2.05
CD40P25942 RNU4-61P-201ENST00000411243 107 ntBASIC2.22□□□□□ -2.05
CD40P25942 HMGN2P35-201ENST00000412164 270 ntBASIC2.22□□□□□ -2.05
CD40P25942 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.22□□□□□ -2.05
CD40P25942 U4.3-201ENST00000621047 82 ntBASIC2.22□□□□□ -2.05
CD40P25942 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CD40P25942 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CD40P25942 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.21□□□□□ -2.06
CD40P25942 MIRLET7C-201ENST00000362160 84 ntBASIC2.21□□□□□ -2.06
CD40P25942 Y_RNA.215-201ENST00000364204 112 ntBASIC2.21□□□□□ -2.06
CD40P25942 Y_RNA.242-201ENST00000364473 110 ntBASIC2.21□□□□□ -2.06
CD40P25942 Y_RNA.393-201ENST00000383936 102 ntBASIC2.21□□□□□ -2.06
CD40P25942 U8.16-201ENST00000391279 133 ntBASIC2.21□□□□□ -2.06
CD40P25942 AC114811.1-201ENST00000507207 168 ntBASIC2.21□□□□□ -2.06
CD40P25942 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.21□□□□□ -2.06
CD40P25942 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.21□□□□□ -2.06
CD40P25942 MIR4435-1-201ENST00000582552 80 ntBASIC2.21□□□□□ -2.06
CD40P25942 AC120024.3-201ENST00000603167 156 ntBASIC2.21□□□□□ -2.06
CD40P25942 MIR6844-201ENST00000637122 62 ntBASIC2.21□□□□□ -2.06
CD40P25942 Y_RNA.66-201ENST00000362862 102 ntBASIC2.2□□□□□ -2.06
CD40P25942 RNU6-199P-201ENST00000362954 107 ntBASIC2.2□□□□□ -2.06
CD40P25942 RNU6-978P-201ENST00000364371 103 ntBASIC2.2□□□□□ -2.06
CD40P25942 RNU6-442P-201ENST00000383968 104 ntBASIC2.2□□□□□ -2.06
CD40P25942 RNU6-424P-201ENST00000384367 105 ntBASIC2.2□□□□□ -2.06
CD40P25942 SNORA80E-201ENST00000384744 137 ntBASIC2.2□□□□□ -2.06
CD40P25942 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.2□□□□□ -2.06
CD40P25942 CYCSP49-201ENST00000420810 319 ntBASIC2.2□□□□□ -2.06
CD40P25942 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
CD40P25942 CYCTP-201ENST00000504253 315 ntBASIC2.2□□□□□ -2.06
CD40P25942 Y_RNA.666-201ENST00000516187 112 ntBASIC2.2□□□□□ -2.06
CD40P25942 RNA5SP320-201ENST00000516263 124 ntBASIC2.2□□□□□ -2.06
CD40P25942 RNA5SP168-201ENST00000516642 112 ntBASIC2.2□□□□□ -2.06
CD40P25942 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.2□□□□□ -2.06
CD40P25942 AC021506.2-201ENST00000612354 169 ntBASIC2.2□□□□□ -2.06
CD40P25942 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.2□□□□□ -2.06
CD40P25942 MIR6733-201ENST00000635723 61 ntBASIC2.2□□□□□ -2.06
CD40P25942 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CD40P25942 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CD40P25942 RNU6-1336P-201ENST00000383886 109 ntBASIC2.19□□□□□ -2.06
CD40P25942 Y_RNA.488-201ENST00000384403 102 ntBASIC2.19□□□□□ -2.06
CD40P25942 RNA5SP210-201ENST00000391034 120 ntBASIC2.19□□□□□ -2.06
CD40P25942 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.19□□□□□ -2.06
CD40P25942 RN7SL499P-201ENST00000481141 276 ntBASIC2.19□□□□□ -2.06
CD40P25942 RNU6-1270P-201ENST00000517128 108 ntBASIC2.19□□□□□ -2.06
CD40P25942 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.19□□□□□ -2.06
CD40P25942 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.19□□□□□ -2.06
CD40P25942 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.19□□□□□ -2.06
CD40P25942 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CD40P25942 AC080100.1-201ENST00000624239 5356 ntBASIC2.18□□□□□ -2.06
CD40P25942 RNA5SP126-201ENST00000365092 109 ntBASIC2.18□□□□□ -2.06
CD40P25942 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.18□□□□□ -2.06
CD40P25942 RPL39P40-201ENST00000445481 146 ntBASIC2.18□□□□□ -2.06
CD40P25942 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.18□□□□□ -2.06
CD40P25942 AC099513.1-201ENST00000490423 301 ntBASIC2.18□□□□□ -2.06
CD40P25942 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.18□□□□□ -2.06
CD40P25942 RNU6-504P-201ENST00000516568 104 ntBASIC2.18□□□□□ -2.06
CD40P25942 MIR4287-201ENST00000579398 78 ntBASIC2.18□□□□□ -2.06
CD40P25942 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
CD40P25942 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CD40P25942 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CD40P25942 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CD40P25942 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CD40P25942 Y_RNA.336-201ENST00000365307 109 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms