Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 SNORD65B-201ENST00000459126 73 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 RNA5SP33-201ENST00000516687 98 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU6-765P-201ENST00000516916 99 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.59□□□□□ -2.5
COL6A3P12111 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU6-86P-201ENST00000606534 107 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 MTND1P7-201ENST00000632801 297 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.59□□□□□ -2.5
COL6A3P12111 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 RNU6-873P-201ENST00000363833 107 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 SNORD51.1-201ENST00000365405 77 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 MIR518B-201ENST00000385127 83 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 U8.15-201ENST00000390947 134 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
COL6A3P12111 RNU6-760P-201ENST00000516078 97 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 AL442663.2-201ENST00000554385 511 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 AF250324.2-201ENST00000608299 610 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 AC022306.3-201ENST00000619930 550 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 MIR382-201ENST00000637119 76 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 MIR1322-201ENST00000638013 71 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 RNU6-777P-201ENST00000364265 104 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 RNU6-673P-201ENST00000365084 104 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 MIR588-201ENST00000384900 83 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 SNORD64-201ENST00000386683 67 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.6□□□□□ -2.51
COL6A3P12111 MTCO3P8-201ENST00000453691 755 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 PRDX4P1-201ENST00000507189 574 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 AP001836.1-201ENST00000604675 523 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.6□□□□□ -2.51
COL6A3P12111 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.6□□□□□ -2.51
COL6A3P12111 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.6□□□□□ -2.51
COL6A3P12111 MT-TF-201ENST00000387314 71 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
COL6A3P12111 RPS29P13-201ENST00000402041 169 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC114491.1-201ENST00000416095 246 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AL353572.1-201ENST00000442490 417 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.61□□□□□ -2.51
COL6A3P12111 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.61□□□□□ -2.51
COL6A3P12111 AC026470.2-201ENST00000561492 181 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 MTND5P34-201ENST00000568888 325 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 MIR6854-201ENST00000614935 69 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC005562.2-201ENST00000618264 111 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 SNORA43.4-201ENST00000629559 138 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 MTCYBP4-201ENST00000401524 249 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 MIR548H1-201ENST00000408610 102 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.61□□□□□ -2.51
COL6A3P12111 RNU7-67P-201ENST00000459003 62 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC010655.3-201ENST00000478818 450 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC091133.4-201ENST00000511142 308 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC068587.4-201ENST00000533893 186 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC073539.2-201ENST00000597113 165 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC137590.2-201ENST00000619709 240 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AL078596.1-201ENST00000624856 447 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.61□□□□□ -2.51
COL6A3P12111 RNU6-960P-201ENST00000364056 120 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 SNORD115-44-201ENST00000365391 82 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 MTND1P11-201ENST00000456661 876 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 MTCO2P6-201ENST00000463134 685 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 RNU2-10P-201ENST00000516375 211 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 RNU6-341P-201ENST00000516973 96 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC109479.2-201ENST00000517842 174 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AGGF1P4-201ENST00000568249 801 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.61□□□□□ -2.51
COL6A3P12111 AL133255.1-201ENST00000606374 441 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC023158.2-201ENST00000614876 543 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 AC139792.3-201ENST00000623525 224 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 Z97988.1-201ENST00000637697 135 ntBASIC-0.61□□□□□ -2.51
COL6A3P12111 SNORA75.4-201ENST00000391278 119 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 MTCO3P19-201ENST00000415864 321 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 MTND4P24-201ENST00000424002 397 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 AC005178.1-201ENST00000508392 440 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 MTND3P25-201ENST00000509243 135 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 AC117522.1-201ENST00000509821 380 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 AC011352.1-201ENST00000512300 793 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 MIR3146-201ENST00000580367 79 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 MTATP6P2-201ENST00000603319 678 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 AP001330.5-201ENST00000607176 411 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 RNU6-740P-201ENST00000364734 105 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 RNU6-946P-201ENST00000383878 107 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 RNU6-245P-201ENST00000384020 107 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 MIR522-201ENST00000385071 87 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 MIR8485-201ENST00000401372 91 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 AC114878.1-201ENST00000441166 358 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 MIR4491-201ENST00000581087 68 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 MIR4520-1-201ENST00000582609 70 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 AL356055.1-201ENST00000602528 446 ntBASIC-0.62□□□□□ -2.51
COL6A3P12111 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU1-141P-201ENST00000364623 158 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms