Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 EEF1E1P1-201ENST00000446998 430 ntBASIC-3.01□□□□□ -2.89
TOP2AP11388 OSBPL9P5-201ENST00000542581 171 ntBASIC-3.01□□□□□ -2.89
TOP2AP11388 FRG2DP-202ENST00000566967 323 ntBASIC-3.01□□□□□ -2.89
TOP2AP11388 MIR664B-201ENST00000626756 61 ntBASIC-3.01□□□□□ -2.89
TOP2AP11388 SNORD116-23-201ENST00000384645 92 ntBASIC-3.02□□□□□ -2.89
TOP2AP11388 MIR208B-201ENST00000401172 77 ntBASIC-3.02□□□□□ -2.89
TOP2AP11388 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-3.02□□□□□ -2.89
TOP2AP11388 AC010587.1-201ENST00000505809 469 ntBASIC-3.02□□□□□ -2.89
TOP2AP11388 AC109479.2-201ENST00000517842 174 ntBASIC-3.02□□□□□ -2.89
TOP2AP11388 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-3.02□□□□□ -2.89
TOP2AP11388 AF250324.2-201ENST00000608299 610 ntBASIC-3.02□□□□□ -2.89
TOP2AP11388 PART1_1.1-201ENST00000611761 217 ntBASIC-3.02□□□□□ -2.89
TOP2AP11388 AC103706.2-201ENST00000638080 240 ntBASIC-3.02□□□□□ -2.89
TOP2AP11388 RNY1P11-201ENST00000363759 113 ntBASIC-3.03□□□□□ -2.89
TOP2AP11388 AL078595.1-201ENST00000404458 226 ntBASIC-3.03□□□□□ -2.89
TOP2AP11388 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-3.03□□□□□ -2.89
TOP2AP11388 AP001836.1-201ENST00000604675 523 ntBASIC-3.03□□□□□ -2.89
TOP2AP11388 RNU6-1266P-201ENST00000362794 105 ntBASIC-3.03□□□□□ -2.9
TOP2AP11388 Y_RNA.284-201ENST00000364806 102 ntBASIC-3.03□□□□□ -2.9
TOP2AP11388 RNU2-10P-201ENST00000516375 211 ntBASIC-3.03□□□□□ -2.9
TOP2AP11388 YWHAEP2-201ENST00000580066 112 ntBASIC-3.03□□□□□ -2.9
TOP2AP11388 RNU1-141P-201ENST00000364623 158 ntBASIC-3.04□□□□□ -2.9
TOP2AP11388 AC004386.2-201ENST00000441858 148 ntBASIC-3.04□□□□□ -2.9
TOP2AP11388 AL358944.1-201ENST00000528537 144 ntBASIC-3.04□□□□□ -2.9
TOP2AP11388 MIR4756-201ENST00000577874 78 ntBASIC-3.04□□□□□ -2.9
TOP2AP11388 MIR4491-201ENST00000581087 68 ntBASIC-3.04□□□□□ -2.9
TOP2AP11388 TCL6_2.1-201ENST00000615162 119 ntBASIC-3.04□□□□□ -2.9
TOP2AP11388 RNU4-92P-201ENST00000363783 136 ntBASIC-3.05□□□□□ -2.9
TOP2AP11388 RNU6-476P-201ENST00000384726 107 ntBASIC-3.05□□□□□ -2.9
TOP2AP11388 RNU6-1093P-201ENST00000391194 107 ntBASIC-3.05□□□□□ -2.9
TOP2AP11388 SNAP23P1-201ENST00000433229 246 ntBASIC-3.05□□□□□ -2.9
TOP2AP11388 RNU6-953P-201ENST00000459154 107 ntBASIC-3.05□□□□□ -2.9
TOP2AP11388 RNU6-1261P-201ENST00000517194 104 ntBASIC-3.05□□□□□ -2.9
TOP2AP11388 AC060788.1-201ENST00000521318 469 ntBASIC-3.05□□□□□ -2.9
TOP2AP11388 AC005776.1-201ENST00000603164 290 ntBASIC-3.05□□□□□ -2.9
TOP2AP11388 SNORA63.5-201ENST00000363548 123 ntBASIC-3.06□□□□□ -2.9
TOP2AP11388 Y_RNA.250-201ENST00000364542 110 ntBASIC-3.06□□□□□ -2.9
TOP2AP11388 MIR487B-201ENST00000385021 84 ntBASIC-3.06□□□□□ -2.9
TOP2AP11388 MTND3P13-201ENST00000574391 343 ntBASIC-3.06□□□□□ -2.9
TOP2AP11388 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-3.06□□□□□ -2.9
TOP2AP11388 RNU6-552P-201ENST00000362869 119 ntBASIC-3.07□□□□□ -2.9
TOP2AP11388 RNA5SP403-201ENST00000363598 108 ntBASIC-3.07□□□□□ -2.9
TOP2AP11388 MT-TM-201ENST00000387377 68 ntBASIC-3.07□□□□□ -2.9
TOP2AP11388 Y_RNA.588-201ENST00000391254 102 ntBASIC-3.07□□□□□ -2.9
TOP2AP11388 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-3.07□□□□□ -2.9
TOP2AP11388 RNU6-914P-201ENST00000516749 109 ntBASIC-3.07□□□□□ -2.9
TOP2AP11388 U6.42-201ENST00000618440 107 ntBASIC-3.07□□□□□ -2.9
TOP2AP11388 AC069503.3-201ENST00000618674 145 ntBASIC-3.07□□□□□ -2.9
TOP2AP11388 RNU6-97P-201ENST00000363387 104 ntBASIC-3.08□□□□□ -2.9
TOP2AP11388 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.08□□□□□ -2.9
TOP2AP11388 Y_RNA.315-201ENST00000365117 102 ntBASIC-3.08□□□□□ -2.9
TOP2AP11388 RNU6-701P-201ENST00000384059 107 ntBASIC-3.08□□□□□ -2.9
TOP2AP11388 EPS15P1-201ENST00000448836 336 ntBASIC-3.08□□□□□ -2.9
TOP2AP11388 U8.19-201ENST00000459095 133 ntBASIC-3.08□□□□□ -2.9
TOP2AP11388 MIR548AE1-201ENST00000583292 70 ntBASIC-3.08□□□□□ -2.9
TOP2AP11388 RNU6-727P-201ENST00000363592 107 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 SNORD115-33-201ENST00000363723 82 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 AC244090.1-201ENST00000441884 93 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-3.09□□□□□ -2.9
TOP2AP11388 RNU6-1084P-201ENST00000362498 107 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 SNORD115-12-201ENST00000362583 82 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 SNORD115-9-201ENST00000362912 82 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 SNORD115-19-201ENST00000363098 82 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 SNORD115-18-201ENST00000363293 82 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 SNORD115-17-201ENST00000364612 82 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 SNORD115-20-201ENST00000365099 82 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-3.09□□□□□ -2.9
TOP2AP11388 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-3.09□□□□□ -2.9
TOP2AP11388 SNORA25.16-201ENST00000516741 121 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 RNU7-172P-201ENST00000517125 64 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 AC068339.1-201ENST00000526965 141 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 MIR4762-201ENST00000585261 75 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 AL078596.1-201ENST00000624856 447 ntBASIC-3.09□□□□□ -2.9
TOP2AP11388 RNU6-1189P-201ENST00000383958 107 ntBASIC-3.1□□□□□ -2.91
TOP2AP11388 RPL39P25-201ENST00000449384 154 ntBASIC-3.1□□□□□ -2.91
TOP2AP11388 AC091965.4-201ENST00000607691 587 ntBASIC-3.1□□□□□ -2.91
TOP2AP11388 Y_RNA.119-201ENST00000363301 96 ntBASIC-3.11□□□□□ -2.91
TOP2AP11388 RNU6-619P-201ENST00000365146 108 ntBASIC-3.11□□□□□ -2.91
TOP2AP11388 RNU2-9P-201ENST00000410194 145 ntBASIC-3.11□□□□□ -2.91
TOP2AP11388 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-3.11□□□□□ -2.91
TOP2AP11388 MRPS10P1-201ENST00000448483 130 ntBASIC-3.11□□□□□ -2.91
TOP2AP11388 RNU7-182P-201ENST00000459009 62 ntBASIC-3.11□□□□□ -2.91
TOP2AP11388 AL049829.1-201ENST00000465411 156 ntBASIC-3.11□□□□□ -2.91
TOP2AP11388 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-3.11□□□□□ -2.91
TOP2AP11388 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-3.11□□□□□ -2.91
TOP2AP11388 AC096586.1-201ENST00000610267 561 ntBASIC-3.11□□□□□ -2.91
TOP2AP11388 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-3.11□□□□□ -2.91
TOP2AP11388 Y_RNA.598-201ENST00000410480 95 ntBASIC-3.12□□□□□ -2.91
TOP2AP11388 RNU4-22P-201ENST00000411058 166 ntBASIC-3.12□□□□□ -2.91
TOP2AP11388 USP9YP30-201ENST00000430729 455 ntBASIC-3.12□□□□□ -2.91
TOP2AP11388 AL031274.1-201ENST00000450334 232 ntBASIC-3.12□□□□□ -2.91
TOP2AP11388 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-3.12□□□□□ -2.91
TOP2AP11388 RNU6-430P-201ENST00000517078 107 ntBASIC-3.12□□□□□ -2.91
TOP2AP11388 EIF1AXP2-201ENST00000555940 413 ntBASIC-3.12□□□□□ -2.91
TOP2AP11388 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-3.12□□□□□ -2.91
TOP2AP11388 RNU6-167P-201ENST00000384292 106 ntBASIC-3.13□□□□□ -2.91
TOP2AP11388 SNORA72.6-201ENST00000384520 129 ntBASIC-3.13□□□□□ -2.91
TOP2AP11388 SNORA49-201ENST00000386157 136 ntBASIC-3.13□□□□□ -2.91
TOP2AP11388 SUMO2P5-201ENST00000506790 245 ntBASIC-3.13□□□□□ -2.91
TOP2AP11388 RNU6-1194P-201ENST00000516208 104 ntBASIC-3.13□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms