Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU7-4P-201ENST00000516961 62 ntBASIC0.46□□□□□ -2.34
CD28P10747 RNU6-1213P-201ENST00000517075 94 ntBASIC0.46□□□□□ -2.34
CD28P10747 AC025627.3-201ENST00000582078 182 ntBASIC0.46□□□□□ -2.34
CD28P10747 AL512605.2-201ENST00000592972 256 ntBASIC0.46□□□□□ -2.34
CD28P10747 AC005176.2-201ENST00000596933 147 ntBASIC0.46□□□□□ -2.34
CD28P10747 AC005972.2-201ENST00000604690 348 ntBASIC0.46□□□□□ -2.34
CD28P10747 AC084782.3-201ENST00000612282 578 ntBASIC0.46□□□□□ -2.34
CD28P10747 AC138305.3-201ENST00000624988 240 ntBASIC0.46□□□□□ -2.34
CD28P10747 SNORD114-23-201ENST00000363536 72 ntBASIC0.45□□□□□ -2.34
CD28P10747 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
CD28P10747 SNORD50B-201ENST00000364995 70 ntBASIC0.45□□□□□ -2.34
CD28P10747 snoU2-30.1-201ENST00000365012 70 ntBASIC0.45□□□□□ -2.34
CD28P10747 RNU6-20P-201ENST00000384106 107 ntBASIC0.45□□□□□ -2.34
CD28P10747 RNU6-310P-201ENST00000384655 107 ntBASIC0.45□□□□□ -2.34
CD28P10747 MIR92A1-201ENST00000385233 78 ntBASIC0.45□□□□□ -2.34
CD28P10747 RNA5SP193-201ENST00000410353 107 ntBASIC0.45□□□□□ -2.34
CD28P10747 Y_RNA.646-201ENST00000410980 101 ntBASIC0.45□□□□□ -2.34
CD28P10747 Y_RNA.621-201ENST00000411065 96 ntBASIC0.45□□□□□ -2.34
CD28P10747 FCF1P9-201ENST00000412546 282 ntBASIC0.45□□□□□ -2.34
CD28P10747 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.45□□□□□ -2.34
CD28P10747 MTND1P4-201ENST00000435196 415 ntBASIC0.45□□□□□ -2.34
CD28P10747 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.45□□□□□ -2.34
CD28P10747 SNORD123-201ENST00000459473 70 ntBASIC0.45□□□□□ -2.34
CD28P10747 RNU6-120P-201ENST00000516077 103 ntBASIC0.45□□□□□ -2.34
CD28P10747 AC036111.3-201ENST00000526389 112 ntBASIC0.45□□□□□ -2.34
CD28P10747 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
CD28P10747 AC022441.3-201ENST00000605737 136 ntBASIC0.45□□□□□ -2.34
CD28P10747 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.45□□□□□ -2.34
CD28P10747 AC007742.2-201ENST00000618226 398 ntBASIC0.45□□□□□ -2.34
CD28P10747 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
CD28P10747 SNORA25.3-201ENST00000363205 127 ntBASIC0.44□□□□□ -2.34
CD28P10747 Y_RNA.330-201ENST00000365230 109 ntBASIC0.44□□□□□ -2.34
CD28P10747 RNU6-1323P-201ENST00000384025 107 ntBASIC0.44□□□□□ -2.34
CD28P10747 RNU6-1297P-201ENST00000384415 104 ntBASIC0.44□□□□□ -2.34
CD28P10747 MIR193B-201ENST00000384907 83 ntBASIC0.44□□□□□ -2.34
CD28P10747 SNORD89-201ENST00000390981 114 ntBASIC0.44□□□□□ -2.34
CD28P10747 SNORD111-201ENST00000408139 94 ntBASIC0.44□□□□□ -2.34
CD28P10747 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.44□□□□□ -2.34
CD28P10747 AC144568.1-201ENST00000520139 137 ntBASIC0.44□□□□□ -2.34
CD28P10747 MIR4423-201ENST00000580922 80 ntBASIC0.44□□□□□ -2.34
CD28P10747 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CD28P10747 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.44□□□□□ -2.34
CD28P10747 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.44□□□□□ -2.34
CD28P10747 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CD28P10747 RNU6-626P-201ENST00000363354 107 ntBASIC0.43□□□□□ -2.34
CD28P10747 RNU6-926P-201ENST00000384075 107 ntBASIC0.43□□□□□ -2.34
CD28P10747 RNU6-131P-201ENST00000391144 107 ntBASIC0.43□□□□□ -2.34
CD28P10747 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.43□□□□□ -2.34
CD28P10747 RNU6-370P-201ENST00000411008 104 ntBASIC0.43□□□□□ -2.34
CD28P10747 MTND1P2-201ENST00000430604 821 ntBASIC0.43□□□□□ -2.34
CD28P10747 AC092628.1-201ENST00000436250 252 ntBASIC0.43□□□□□ -2.34
CD28P10747 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.43□□□□□ -2.34
CD28P10747 MTND4P17-201ENST00000470444 350 ntBASIC0.43□□□□□ -2.34
CD28P10747 RNU6-470P-201ENST00000515954 104 ntBASIC0.43□□□□□ -2.34
CD28P10747 RNU6-155P-201ENST00000516347 100 ntBASIC0.43□□□□□ -2.34
CD28P10747 RNU6-830P-201ENST00000516353 107 ntBASIC0.43□□□□□ -2.34
CD28P10747 SNORA18.7-201ENST00000516910 131 ntBASIC0.43□□□□□ -2.34
CD28P10747 AC023827.1-201ENST00000569247 97 ntBASIC0.43□□□□□ -2.34
CD28P10747 AC087685.1-201ENST00000587507 141 ntBASIC0.43□□□□□ -2.34
CD28P10747 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.43□□□□□ -2.34
CD28P10747 AC022306.2-201ENST00000617563 647 ntBASIC0.43□□□□□ -2.34
CD28P10747 uc_338.17-201ENST00000619633 179 ntBASIC0.43□□□□□ -2.34
CD28P10747 AC134026.1-201ENST00000623249 2239 ntBASIC0.43□□□□□ -2.34
CD28P10747 Y_RNA.310-201ENST00000365063 113 ntBASIC0.42□□□□□ -2.34
CD28P10747 Y_RNA.370-201ENST00000365589 108 ntBASIC0.42□□□□□ -2.34
CD28P10747 RNU6-890P-201ENST00000384121 107 ntBASIC0.42□□□□□ -2.34
CD28P10747 Y_RNA.474-201ENST00000384341 102 ntBASIC0.42□□□□□ -2.34
CD28P10747 Y_RNA.570-201ENST00000384750 101 ntBASIC0.42□□□□□ -2.34
CD28P10747 RNU6-192P-201ENST00000391253 100 ntBASIC0.42□□□□□ -2.34
CD28P10747 RNU6-613P-201ENST00000410412 108 ntBASIC0.42□□□□□ -2.34
CD28P10747 RNU6-710P-201ENST00000410424 105 ntBASIC0.42□□□□□ -2.34
CD28P10747 RNU6-733P-201ENST00000410759 104 ntBASIC0.42□□□□□ -2.34
CD28P10747 MCFD2P1-201ENST00000417812 300 ntBASIC0.42□□□□□ -2.34
CD28P10747 SNRPGP10-201ENST00000432323 225 ntBASIC0.42□□□□□ -2.34
CD28P10747 SNRPGP14-201ENST00000435400 219 ntBASIC0.42□□□□□ -2.34
CD28P10747 RPL30P15-201ENST00000457129 321 ntBASIC0.42□□□□□ -2.34
CD28P10747 RNU6-496P-201ENST00000516145 99 ntBASIC0.42□□□□□ -2.34
CD28P10747 RNU6-264P-201ENST00000517134 104 ntBASIC0.42□□□□□ -2.34
CD28P10747 AP003484.1-201ENST00000530974 250 ntBASIC0.42□□□□□ -2.34
CD28P10747 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.42□□□□□ -2.34
CD28P10747 MIR5690-201ENST00000583739 73 ntBASIC0.42□□□□□ -2.34
CD28P10747 AC008133.2-201ENST00000624540 351 ntBASIC0.42□□□□□ -2.34
CD28P10747 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
CD28P10747 TPTEP1-208ENST00000636884 213 ntBASIC0.42□□□□□ -2.34
CD28P10747 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
CD28P10747 RNU6-1084P-201ENST00000362498 107 ntBASIC0.41□□□□□ -2.34
CD28P10747 Y_RNA.27-201ENST00000362540 103 ntBASIC0.41□□□□□ -2.34
CD28P10747 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
CD28P10747 SNORD81.2-201ENST00000365153 76 ntBASIC0.41□□□□□ -2.34
CD28P10747 Y_RNA.368-201ENST00000365547 113 ntBASIC0.41□□□□□ -2.34
CD28P10747 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CD28P10747 MIR1827-201ENST00000408549 66 ntBASIC0.41□□□□□ -2.34
CD28P10747 SNORD99-201ENST00000408612 74 ntBASIC0.41□□□□□ -2.34
CD28P10747 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.41□□□□□ -2.34
CD28P10747 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.41□□□□□ -2.34
CD28P10747 PRDX4P1-201ENST00000507189 574 ntBASIC0.41□□□□□ -2.34
CD28P10747 RNU7-116P-201ENST00000516940 62 ntBASIC0.41□□□□□ -2.34
CD28P10747 Y_RNA.714-201ENST00000517065 90 ntBASIC0.41□□□□□ -2.34
CD28P10747 RN7SKP295-201ENST00000517264 153 ntBASIC0.41□□□□□ -2.34
CD28P10747 MIR1273G-201ENST00000577677 100 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms