Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 AL138825.1-201ENST00000618587 192 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 RNA5SP432-201ENST00000362480 116 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-1115P-201ENST00000362490 106 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 RNA5SP48-201ENST00000363969 126 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 SNORD14E-201ENST00000364009 85 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.310-201ENST00000365063 113 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.456-201ENST00000384232 111 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.462-201ENST00000384268 102 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.496-201ENST00000384444 101 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 SNORD123-201ENST00000459473 70 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 SNORD19B-201ENST00000459623 84 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 RPL39P28-201ENST00000465655 155 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 AC091951.2-201ENST00000500762 203 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 RNU7-43P-201ENST00000516554 64 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 RNA5SP102-201ENST00000516865 106 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 RNU7-110P-201ENST00000516891 62 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 MIR5188-201ENST00000583467 113 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 RPS29P30-201ENST00000600975 111 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 AC011373.1-201ENST00000607270 237 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 AC104985.2-201ENST00000620598 500 ntBASIC0.64□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.203-201ENST00000364106 102 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.368-201ENST00000365547 113 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 MIR608-201ENST00000384820 100 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 MIR1185-1-201ENST00000408598 86 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 AL160004.2-201ENST00000432935 350 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 FABP5P4-201ENST00000437203 171 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 AP003716.2-201ENST00000528260 108 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 AC024405.2-202ENST00000532731 184 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 AC023827.1-201ENST00000569247 97 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 AP003357.1-201ENST00000604497 148 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 AL121655.1-201ENST00000605811 308 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 JPX_2.1-201ENST00000614161 69 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 SEPT14P17-201ENST00000617978 177 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 AC091925.1-201ENST00000623204 462 ntBASIC0.63□□□□□ -2.31
IGHV3-43DP0DP04 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 SNORD81.1-201ENST00000363064 77 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 RNY1P10-201ENST00000363268 113 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.356-201ENST00000365475 113 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.458-201ENST00000384240 102 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 MIR802-201ENST00000390235 94 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 MTND1P14-201ENST00000427400 950 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.638-201ENST00000459374 113 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 RPL23AP54-201ENST00000495129 419 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 FGF7P4-201ENST00000509595 295 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 RNU4-77P-201ENST00000516692 156 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 AC131055.1-201ENST00000584626 316 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 AC007742.2-201ENST00000618226 398 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 AL606534.2-204ENST00000635008 178 ntBASIC0.62□□□□□ -2.31
IGHV3-43DP0DP04 MIR373-201ENST00000362273 69 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.252-201ENST00000364556 101 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.303-201ENST00000364998 94 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 RNU1-115P-201ENST00000365329 160 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 SNORD38C-201ENST00000384381 69 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.529-201ENST00000384586 119 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-21P-201ENST00000384710 107 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 RNU4-30P-201ENST00000410245 143 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 AF228730.4-201ENST00000421457 183 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 AC236972.2-201ENST00000434979 310 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 RN7SKP164-201ENST00000516138 266 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-875P-201ENST00000516488 106 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 SNORA40.14-201ENST00000516543 86 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 DEFB108E-201ENST00000524692 240 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 AC109810.1-201ENST00000534066 224 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 AC127455.1-201ENST00000565496 145 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 MIR3145-201ENST00000580727 82 ntBASIC0.61□□□□□ -2.31
IGHV3-43DP0DP04 U8.7-201ENST00000364940 136 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.439-201ENST00000384119 94 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-937P-201ENST00000384325 106 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.551-201ENST00000384661 102 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 MIR605-201ENST00000385078 83 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 MIR146A-201ENST00000385201 99 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-1009P-201ENST00000390996 107 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-976P-201ENST00000516086 111 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 RNU7-115P-201ENST00000516433 55 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 AC136628.3-201ENST00000521868 290 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 AC093027.1-201ENST00000546698 429 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 AC087685.1-201ENST00000587507 141 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 MIR548AY-201ENST00000617669 107 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 AC008133.2-201ENST00000624540 351 ntBASIC0.6□□□□□ -2.31
IGHV3-43DP0DP04 AC134026.1-201ENST00000623249 2239 ntBASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.5-201ENST00000362334 102 ntBASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.148-201ENST00000363557 117 ntBASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-1209P-201ENST00000363655 107 ntBASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-442P-201ENST00000383968 104 ntBASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.526-201ENST00000384572 110 ntBASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 MTND5P15-201ENST00000434246 349 ntBASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 U8.20-201ENST00000459445 131 ntBASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.59□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.713-201ENST00000517013 96 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms