Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RN7SKP179-201ENST00000516126 217 ntBASIC1.45□□□□□ -2.18
HMGB1P09429 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGB1P09429 AC040926.1-201ENST00000530195 238 ntBASIC1.45□□□□□ -2.18
HMGB1P09429 AL020996.3-201ENST00000606617 222 ntBASIC1.45□□□□□ -2.18
HMGB1P09429 RNA5SP99-201ENST00000364020 114 ntBASIC1.44□□□□□ -2.18
HMGB1P09429 RNU7-115P-201ENST00000516433 55 ntBASIC1.44□□□□□ -2.18
HMGB1P09429 RNU7-43P-201ENST00000516554 64 ntBASIC1.44□□□□□ -2.18
HMGB1P09429 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGB1P09429 MIR4781-201ENST00000585250 76 ntBASIC1.44□□□□□ -2.18
HMGB1P09429 MIR548AY-201ENST00000617669 107 ntBASIC1.44□□□□□ -2.18
HMGB1P09429 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
HMGB1P09429 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMGB1P09429 Y_RNA.197-201ENST00000364004 102 ntBASIC1.43□□□□□ -2.18
HMGB1P09429 POLR2J4-204ENST00000418424 324 ntBASIC1.43□□□□□ -2.18
HMGB1P09429 POLR2KP2-201ENST00000438155 177 ntBASIC1.43□□□□□ -2.18
HMGB1P09429 AC007742.2-201ENST00000618226 398 ntBASIC1.43□□□□□ -2.18
HMGB1P09429 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HMGB1P09429 Y_RNA.383-201ENST00000383855 97 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 SNORA22-201ENST00000383907 134 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 SNORD63-201ENST00000384262 68 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 RNY3P14-201ENST00000384309 102 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 SNORD38C-201ENST00000384381 69 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 SNORA22C-201ENST00000384614 134 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 BTF3P4-201ENST00000418852 495 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 AC090821.2-201ENST00000523552 176 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 AC127455.1-201ENST00000565496 145 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 AC023827.1-201ENST00000569247 97 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 AP000942.3-201ENST00000603702 160 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 AC007485.1-201ENST00000616755 206 ntBASIC1.42□□□□□ -2.18
HMGB1P09429 MIR378A-201ENST00000362177 66 ntBASIC1.41□□□□□ -2.18
HMGB1P09429 Y_RNA.148-201ENST00000363557 117 ntBASIC1.41□□□□□ -2.18
HMGB1P09429 RPS3AP1-201ENST00000413190 320 ntBASIC1.41□□□□□ -2.18
HMGB1P09429 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGB1P09429 HMGN1P10-201ENST00000474557 553 ntBASIC1.41□□□□□ -2.18
HMGB1P09429 AL080274.1-201ENST00000605565 220 ntBASIC1.41□□□□□ -2.18
HMGB1P09429 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HMGB1P09429 RNU6-1209P-201ENST00000363655 107 ntBASIC1.4□□□□□ -2.19
HMGB1P09429 Y_RNA.424-201ENST00000384063 103 ntBASIC1.4□□□□□ -2.19
HMGB1P09429 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.4□□□□□ -2.19
HMGB1P09429 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGB1P09429 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.4□□□□□ -2.19
HMGB1P09429 RNA5SP48-201ENST00000363969 126 ntBASIC1.39□□□□□ -2.19
HMGB1P09429 MT-TD-201ENST00000387419 68 ntBASIC1.39□□□□□ -2.19
HMGB1P09429 AC093852.1-201ENST00000503587 266 ntBASIC1.39□□□□□ -2.19
HMGB1P09429 SEPT14P8-201ENST00000508026 178 ntBASIC1.39□□□□□ -2.19
HMGB1P09429 RNU6-1170P-201ENST00000515974 106 ntBASIC1.39□□□□□ -2.19
HMGB1P09429 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGB1P09429 SEPT14P17-201ENST00000617978 177 ntBASIC1.39□□□□□ -2.19
HMGB1P09429 RNU4-80P-201ENST00000363200 141 ntBASIC1.38□□□□□ -2.19
HMGB1P09429 RNU6-1048P-201ENST00000364054 107 ntBASIC1.38□□□□□ -2.19
HMGB1P09429 Y_RNA.813-201ENST00000364639 102 ntBASIC1.38□□□□□ -2.19
HMGB1P09429 RNU1-36P-201ENST00000365130 165 ntBASIC1.38□□□□□ -2.19
HMGB1P09429 RNU6-442P-201ENST00000383968 104 ntBASIC1.38□□□□□ -2.19
HMGB1P09429 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGB1P09429 AC010655.3-201ENST00000478818 450 ntBASIC1.38□□□□□ -2.19
HMGB1P09429 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.38□□□□□ -2.19
HMGB1P09429 AC211469.2-201ENST00000605461 205 ntBASIC1.38□□□□□ -2.19
HMGB1P09429 MIR1185-1-201ENST00000408598 86 ntBASIC1.37□□□□□ -2.19
HMGB1P09429 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGB1P09429 MIR4295-201ENST00000585286 85 ntBASIC1.37□□□□□ -2.19
HMGB1P09429 SNORD113-5-201ENST00000607261 78 ntBASIC1.37□□□□□ -2.19
HMGB1P09429 PART1_1.1-201ENST00000611761 217 ntBASIC1.37□□□□□ -2.19
HMGB1P09429 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
HMGB1P09429 Y_RNA.796-201ENST00000364268 102 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 Y_RNA.286-201ENST00000364813 102 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 Y_RNA.799-201ENST00000364992 102 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 MIR1278-201ENST00000408753 81 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 SNORA36B-201ENST00000410438 131 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 FABP5P4-201ENST00000437203 171 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 RNU7-141P-201ENST00000459304 62 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 RNU6-197P-201ENST00000516680 100 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 MIR2681-201ENST00000581814 105 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 AC087685.1-201ENST00000587507 141 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 AL133255.1-201ENST00000606374 441 ntBASIC1.36□□□□□ -2.19
HMGB1P09429 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMGB1P09429 Y_RNA.140-201ENST00000363474 103 ntBASIC1.35□□□□□ -2.19
HMGB1P09429 RNU6-130P-201ENST00000411112 103 ntBASIC1.35□□□□□ -2.19
HMGB1P09429 RNU6-437P-201ENST00000459408 95 ntBASIC1.35□□□□□ -2.19
HMGB1P09429 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.35□□□□□ -2.19
HMGB1P09429 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.35□□□□□ -2.19
HMGB1P09429 PSMC1P5-201ENST00000512850 177 ntBASIC1.35□□□□□ -2.19
HMGB1P09429 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGB1P09429 RPL23AP91-201ENST00000569211 455 ntBASIC1.35□□□□□ -2.19
HMGB1P09429 AC131055.1-201ENST00000584626 316 ntBASIC1.35□□□□□ -2.19
HMGB1P09429 MIR4251-201ENST00000635819 61 ntBASIC1.35□□□□□ -2.19
HMGB1P09429 AC134026.1-201ENST00000623249 2239 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 RNU6-1248P-201ENST00000391096 64 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 MIR1302-11-201ENST00000408051 138 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 MIR1302-9-201ENST00000408365 138 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 MIR1302-10-201ENST00000408734 138 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 RNU2-64P-201ENST00000411315 191 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 RNU6-397P-201ENST00000516226 104 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 RNU6-1046P-201ENST00000516538 107 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 MIR548AR-201ENST00000582191 57 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 MIR1302-2-201ENST00000607096 138 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 AC008133.2-201ENST00000624540 351 ntBASIC1.34□□□□□ -2.19
HMGB1P09429 AL391987.6-201ENST00000305671 199 ntBASIC1.33□□□□□ -2.2
HMGB1P09429 MIR369-201ENST00000362155 70 ntBASIC1.33□□□□□ -2.2
HMGB1P09429 RNU2-14P-201ENST00000411053 191 ntBASIC1.33□□□□□ -2.2
HMGB1P09429 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 230.1 ms