Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MTND4LP26-201ENST00000518144 282 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 MIR5701-3-201ENST00000578890 82 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 MIR548AR-201ENST00000582191 57 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 MIR5701-1-201ENST00000585138 82 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 AC005972.2-201ENST00000604690 348 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 MIR5701-2-201ENST00000615634 82 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU6-626P-201ENST00000363354 107 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 Y_RNA.148-201ENST00000363557 117 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 RNU6-961P-201ENST00000363893 105 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 MIR516B2-201ENST00000385190 85 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 SNORA75.4-201ENST00000391278 119 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 MRPS18CP6-201ENST00000423587 223 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.32□□□□□ -2.36
COL4A2P08572 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.32□□□□□ -2.36
COL4A2P08572 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.32□□□□□ -2.36
COL4A2P08572 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.32□□□□□ -2.36
COL4A2P08572 AC023827.1-201ENST00000569247 97 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 AC018638.8-201ENST00000588755 281 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.32□□□□□ -2.36
COL4A2P08572 AL591926.4-201ENST00000616895 298 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 AC002553.4-201ENST00000616896 331 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 U4.5-201ENST00000617137 123 ntBASIC0.32□□□□□ -2.36
COL4A2P08572 RNY4P3-201ENST00000365254 95 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 Y_RNA.482-201ENST00000384377 111 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 RNU6-1237P-201ENST00000384777 107 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 RNU6-1148P-201ENST00000410992 104 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 AL022718.1-201ENST00000412004 84 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 MTND3P8-201ENST00000412909 339 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 AC092423.1-201ENST00000430165 186 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 RPS3AP52-201ENST00000435639 297 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 SNORD45.4-201ENST00000516629 73 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 Y_RNA.708-201ENST00000516950 96 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 AF235103.2-201ENST00000525753 346 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 AC131055.1-201ENST00000584626 316 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 AL136317.1-201ENST00000612653 226 ntBASIC0.31□□□□□ -2.36
COL4A2P08572 RNU4-24P-201ENST00000364565 139 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 RNU4-75P-201ENST00000364621 146 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 SNORD50B-201ENST00000364995 70 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 Y_RNA.339-201ENST00000365325 102 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 Y_RNA.368-201ENST00000365547 113 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
COL4A2P08572 Y_RNA.404-201ENST00000383978 102 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 RNU6-131P-201ENST00000391144 107 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 RNU2-54P-201ENST00000410299 190 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 AC107399.1-201ENST00000451226 265 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 MTND5P5-201ENST00000503764 376 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 SNORA25.10-201ENST00000515926 124 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 RNU6-436P-201ENST00000516171 114 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A2P08572 AC144568.1-201ENST00000520139 137 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 AC125232.2-201ENST00000592457 143 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 AC240442.1-201ENST00000616055 283 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 AL008636.1-201ENST00000625038 1018 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 MIR1-1-201ENST00000362147 71 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 RNU6-601P-201ENST00000384540 107 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 MIR522-201ENST00000385071 87 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A2P08572 AL390729.2-201ENST00000416137 156 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 AC244098.3-201ENST00000424803 96 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 MTND4P28-201ENST00000426217 387 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A2P08572 AL035398.1-201ENST00000430869 322 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 RPL7P42-201ENST00000481005 679 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 AC116353.2-201ENST00000505332 712 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 PRDX4P1-201ENST00000507189 574 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 RNU2-12P-201ENST00000517216 168 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A2P08572 AC005014.2-201ENST00000607795 599 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 uc_338.17-201ENST00000619633 179 ntBASIC0.3□□□□□ -2.36
COL4A2P08572 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.3□□□□□ -2.36
COL4A2P08572 AC134026.1-201ENST00000623249 2239 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 RNU6-396P-201ENST00000365369 105 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 SNORD38C-201ENST00000384381 69 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 Y_RNA.577-201ENST00000384794 101 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 MIR548K-201ENST00000408406 116 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 AL353997.1-201ENST00000432936 108 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 FCF1P4-201ENST00000448326 183 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 MTND3P10-201ENST00000450967 341 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 RNU7-41P-201ENST00000515917 61 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 RNU6-720P-201ENST00000516363 108 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 RNU4-77P-201ENST00000516692 156 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 AC011195.1-201ENST00000578177 177 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 MIR1244-1-201ENST00000612829 85 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 MIR1244-3-201ENST00000635744 85 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 MIR1244-2-201ENST00000636449 85 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 MIR1244-4-202ENST00000636813 85 ntBASIC0.29□□□□□ -2.36
COL4A2P08572 RNU6-874P-201ENST00000362390 105 ntBASIC0.28□□□□□ -2.36
COL4A2P08572 RNU6-623P-201ENST00000363143 105 ntBASIC0.28□□□□□ -2.36
COL4A2P08572 Y_RNA.170-201ENST00000363746 110 ntBASIC0.28□□□□□ -2.36
COL4A2P08572 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
COL4A2P08572 SNORA2B-201ENST00000384583 137 ntBASIC0.28□□□□□ -2.36
COL4A2P08572 SNORD105-201ENST00000386910 85 ntBASIC0.28□□□□□ -2.36
COL4A2P08572 RNU6-710P-201ENST00000410424 105 ntBASIC0.28□□□□□ -2.36
COL4A2P08572 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.28□□□□□ -2.36
COL4A2P08572 RNU7-30P-201ENST00000516835 62 ntBASIC0.28□□□□□ -2.36
COL4A2P08572 MIR5690-201ENST00000583739 73 ntBASIC0.28□□□□□ -2.36
COL4A2P08572 POLR3GP1-201ENST00000594073 261 ntBASIC0.28□□□□□ -2.36
COL4A2P08572 AC090517.2-201ENST00000614966 680 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 278.2 ms