Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 Y_RNA.714-201ENST00000517065 90 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 AC023827.1-201ENST00000569247 97 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 AC131055.1-201ENST00000584626 316 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 AL353765.1-201ENST00000605514 183 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 MIR6513-201ENST00000621188 64 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
CAPN1P07384 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 RNU6-324P-201ENST00000363957 106 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 SNORD14.1-201ENST00000365609 90 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 RNU6-708P-201ENST00000384217 107 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 MT-TL1-201ENST00000386347 75 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 RNU6-192P-201ENST00000391253 100 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 RNU6-876P-201ENST00000391295 104 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
CAPN1P07384 U7.7-201ENST00000459276 60 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 RNU6-470P-201ENST00000515954 104 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 RN7SKP164-201ENST00000516138 266 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 SNORD45.4-201ENST00000516629 73 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 SNORA18.7-201ENST00000516910 131 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 MTND4LP26-201ENST00000518144 282 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 AC022616.4-201ENST00000522985 181 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 Z83818.1-201ENST00000603584 150 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 SEPT14P17-201ENST00000617978 177 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 AC138305.3-201ENST00000624988 240 ntBASIC0.63□□□□□ -2.31
CAPN1P07384 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.63□□□□□ -2.31
CAPN1P07384 Y_RNA.146-201ENST00000363549 102 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 Y_RNA.393-201ENST00000383936 102 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 Y_RNA.474-201ENST00000384341 102 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 U8.19-201ENST00000459095 133 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 AC144568.1-201ENST00000520139 137 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 MIR4659A-201ENST00000580269 81 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 MIR4764-201ENST00000580680 88 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 AC005972.2-201ENST00000604690 348 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 AC022306.2-201ENST00000617563 647 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 AC139792.2-201ENST00000624218 587 ntBASIC0.62□□□□□ -2.31
CAPN1P07384 Y_RNA.248-201ENST00000364501 109 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 SNORD50B-201ENST00000364995 70 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 SNORA72-201ENST00000384339 132 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 SNORD89-201ENST00000390981 114 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 RNU6-994P-201ENST00000410507 111 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 Y_RNA.605-201ENST00000410577 105 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 AC113410.1-201ENST00000505029 247 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 AC109810.1-201ENST00000534066 224 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 MIR5690-201ENST00000583739 73 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 U2.1-201ENST00000618978 145 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 U6.92-201ENST00000636464 89 ntBASIC0.61□□□□□ -2.31
CAPN1P07384 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CAPN1P07384 Y_RNA.329-201ENST00000365209 107 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 MIR7-2-201ENST00000384970 110 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 MIR559-201ENST00000385188 96 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 MIR936-201ENST00000401264 98 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 AC096644.2-201ENST00000429278 159 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 SNRPGP10-201ENST00000432323 225 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.6□□□□□ -2.31
CAPN1P07384 SNORD123-201ENST00000459473 70 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 PRDX4P1-201ENST00000507189 574 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 AC093027.1-201ENST00000546698 429 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 AC022441.3-201ENST00000605737 136 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 7SK.10-201ENST00000621414 298 ntBASIC0.6□□□□□ -2.31
CAPN1P07384 RNA5SP48-201ENST00000363969 126 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 Y_RNA.230-201ENST00000364348 109 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 snoU2-30.1-201ENST00000365012 70 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 Y_RNA.314-201ENST00000365114 102 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 MCFD2P1-201ENST00000417812 300 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 MTND1P2-201ENST00000430604 821 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 RNU6-559P-201ENST00000516151 98 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 RNU7-43P-201ENST00000516554 64 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 RBM11P1-201ENST00000604951 799 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 RNU6-94P-201ENST00000607728 107 ntBASIC0.59□□□□□ -2.31
CAPN1P07384 MIR628-201ENST00000385229 95 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 RNU6-131P-201ENST00000391144 107 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 MIR1302-7-201ENST00000408841 72 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 RNA5SP193-201ENST00000410353 107 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 HMGN2P32-201ENST00000444648 269 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 Y_RNA.653-201ENST00000459091 95 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 RNU6-911P-201ENST00000516523 104 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 RN7SL793P-201ENST00000583259 296 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 AC113139.1-201ENST00000605049 239 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 AC092794.1-201ENST00000612734 582 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 U6atac.1-201ENST00000616025 117 ntBASIC0.58□□□□□ -2.32
CAPN1P07384 Y_RNA.27-201ENST00000362540 103 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 Y_RNA.570-201ENST00000384750 101 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 SNORD99-201ENST00000408612 74 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 RNU6-855P-201ENST00000410395 104 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 RNU6-1110P-201ENST00000516462 101 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 RN7SKP295-201ENST00000517264 153 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 AC036111.3-201ENST00000526389 112 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms