Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RNU6-929P-201ENST00000384429 107 ntBASIC-0.27□□□□□ -2.45
CTSDP07339 MIR593-201ENST00000384856 100 ntBASIC-0.27□□□□□ -2.45
CTSDP07339 MIR125B2-201ENST00000385128 89 ntBASIC-0.27□□□□□ -2.45
CTSDP07339 MTCO2P27-201ENST00000420740 428 ntBASIC-0.27□□□□□ -2.45
CTSDP07339 AC069271.1-201ENST00000445577 156 ntBASIC-0.27□□□□□ -2.45
CTSDP07339 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.27□□□□□ -2.45
CTSDP07339 MIR18B-201ENST00000454574 71 ntBASIC-0.27□□□□□ -2.45
CTSDP07339 SNORA40.9-201ENST00000515895 93 ntBASIC-0.27□□□□□ -2.45
CTSDP07339 SNORD92-201ENST00000585078 85 ntBASIC-0.27□□□□□ -2.45
CTSDP07339 AC005972.2-201ENST00000604690 348 ntBASIC-0.27□□□□□ -2.45
CTSDP07339 RNY1P16-201ENST00000363063 111 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 RNA5SP325-201ENST00000363756 130 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 RNU6-879P-201ENST00000364328 108 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 U8.7-201ENST00000364940 136 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 RNU6-442P-201ENST00000383968 104 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.28□□□□□ -2.45
CTSDP07339 AC005042.3-201ENST00000453230 174 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 RNU6-448P-201ENST00000517052 107 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 AC087685.1-201ENST00000587507 141 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 AC087752.4-201ENST00000605911 462 ntBASIC-0.28□□□□□ -2.45
CTSDP07339 RNU6-306P-201ENST00000384617 107 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 MIR190B-201ENST00000401119 79 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RNU6-847P-201ENST00000411115 108 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.29□□□□□ -2.46
CTSDP07339 RNU6-848P-201ENST00000515948 107 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RN7SKP298-201ENST00000515950 94 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RNU4-49P-201ENST00000516080 140 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RNU6-617P-201ENST00000516147 107 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RNU6-473P-201ENST00000516164 107 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RNU6-256P-201ENST00000516747 97 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RNU2-12P-201ENST00000517216 168 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RNU7-181P-201ENST00000517234 74 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.29□□□□□ -2.46
CTSDP07339 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.29□□□□□ -2.46
CTSDP07339 RNU6-324P-201ENST00000363957 106 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 RNU6-187P-201ENST00000384139 106 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 MIR892B-201ENST00000401279 77 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 MIR1257-201ENST00000408490 117 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 SNRPGP14-201ENST00000435400 219 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.3□□□□□ -2.46
CTSDP07339 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.3□□□□□ -2.46
CTSDP07339 RNU2-13P-201ENST00000515909 113 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 RNU7-156P-201ENST00000517214 74 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 LRRC34P1-201ENST00000542742 915 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 AL158211.1-201ENST00000566763 763 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 AL050303.3-201ENST00000613704 284 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.3□□□□□ -2.46
CTSDP07339 AC068137.3-201ENST00000639191 341 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 AC010332.2-201ENST00000613083 1904 ntBASIC-0.3□□□□□ -2.46
CTSDP07339 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 SNORA75-201ENST00000384158 137 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 MIR802-201ENST00000390235 94 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 AL031003.1-201ENST00000404229 172 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 AC090844.1-201ENST00000422019 156 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 RNU7-185P-201ENST00000459215 60 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 AC104692.1-201ENST00000472406 90 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 MTND3P7-201ENST00000474435 343 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 AC091959.1-201ENST00000495857 238 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.31□□□□□ -2.46
CTSDP07339 RNU7-129P-201ENST00000516128 62 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 RNU6-469P-201ENST00000516253 101 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 MIR7107-201ENST00000611489 80 ntBASIC-0.31□□□□□ -2.46
CTSDP07339 RNA5SP257-201ENST00000363023 116 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 RNU6-268P-201ENST00000364174 107 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 RNA5SP128-201ENST00000365305 116 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 MIR214-201ENST00000385214 110 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
CTSDP07339 RNU6-855P-201ENST00000410395 104 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 AL512326.2-201ENST00000426359 151 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 RNU7-87P-201ENST00000459343 62 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 snoU13.16-201ENST00000459350 104 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 RNU7-66P-201ENST00000459469 62 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.32□□□□□ -2.46
CTSDP07339 MIR3672-201ENST00000584290 82 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 AC006380.1-201ENST00000603598 186 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 AL391262.2-201ENST00000622466 494 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 SNORD38B-202ENST00000625943 69 ntBASIC-0.32□□□□□ -2.46
CTSDP07339 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.33□□□□□ -2.46
CTSDP07339 SNORD116-11-201ENST00000383882 92 ntBASIC-0.33□□□□□ -2.46
CTSDP07339 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.33□□□□□ -2.46
CTSDP07339 RNU6-318P-201ENST00000384283 103 ntBASIC-0.33□□□□□ -2.46
CTSDP07339 MIR625-201ENST00000385047 85 ntBASIC-0.33□□□□□ -2.46
CTSDP07339 MIR760-201ENST00000390220 80 ntBASIC-0.33□□□□□ -2.46
CTSDP07339 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.33□□□□□ -2.46
CTSDP07339 RNU2-61P-201ENST00000411069 191 ntBASIC-0.33□□□□□ -2.46
CTSDP07339 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.33□□□□□ -2.46
CTSDP07339 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 1067.6 ms