Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SNORD123-201ENST00000459473 70 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 RNA5SP102-201ENST00000516865 106 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 SNORD116.3-201ENST00000517176 78 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 AL355375.2-201ENST00000574825 175 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 MIR4423-201ENST00000580922 80 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 AC131055.1-201ENST00000584626 316 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 POLR3GP1-201ENST00000594073 261 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.57□□□□□ -2.32
HLA-DQA1P01909 DEFB117-201ENST00000602356 141 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 MIR6857-201ENST00000613267 93 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 SEPT14P17-201ENST00000617978 177 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 AC091925.1-201ENST00000623204 462 ntBASIC0.57□□□□□ -2.32
HLA-DQA1P01909 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.148-201ENST00000363557 117 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.187-201ENST00000363918 113 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 U8.7-201ENST00000364940 136 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.331-201ENST00000365267 102 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 RNU6-1335P-201ENST00000365426 107 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 SNORD14.1-201ENST00000365609 90 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.458-201ENST00000384240 102 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 AL035398.1-201ENST00000430869 322 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 AC005042.3-201ENST00000453230 174 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 AC010655.3-201ENST00000478818 450 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 AC117454.1-201ENST00000491120 168 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 RN7SKP164-201ENST00000516138 266 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 AC024405.2-202ENST00000532731 184 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 AC109810.1-201ENST00000534066 224 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 AC004817.2-201ENST00000561794 651 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 MIR3145-201ENST00000580727 82 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 MIR5188-201ENST00000583467 113 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 AC092447.9-201ENST00000603395 144 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 AC010205.1-201ENST00000616668 449 ntBASIC0.56□□□□□ -2.32
HLA-DQA1P01909 HSBP1P2-201ENST00000299671 229 ntBASIC0.55□□□□□ -2.32
HLA-DQA1P01909 SNORA72.1-201ENST00000363485 129 ntBASIC0.55□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.303-201ENST00000364998 94 ntBASIC0.55□□□□□ -2.32
HLA-DQA1P01909 SNORD28B-201ENST00000390993 75 ntBASIC0.55□□□□□ -2.32
HLA-DQA1P01909 RNU6-710P-201ENST00000410424 105 ntBASIC0.55□□□□□ -2.32
HLA-DQA1P01909 MTND1P14-201ENST00000427400 950 ntBASIC0.55□□□□□ -2.32
HLA-DQA1P01909 RNU4-77P-201ENST00000516692 156 ntBASIC0.55□□□□□ -2.32
HLA-DQA1P01909 MIR548AR-201ENST00000582191 57 ntBASIC0.55□□□□□ -2.32
HLA-DQA1P01909 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.55□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.5-201ENST00000362334 102 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 RNU6-1115P-201ENST00000362490 106 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.203-201ENST00000364106 102 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.456-201ENST00000384232 111 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 MIR1302-7-201ENST00000408841 72 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 RNU2-64P-201ENST00000411315 191 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 RNU7-152P-201ENST00000458982 64 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 U8.19-201ENST00000459095 133 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.661-201ENST00000516003 99 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 RNU7-43P-201ENST00000516554 64 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 AC136628.3-201ENST00000521868 290 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 AP003357.1-201ENST00000604497 148 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 AC011373.1-201ENST00000607270 237 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 SNORD58B-201ENST00000607313 66 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 AC108706.1-201ENST00000611053 297 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 AC134026.1-201ENST00000623249 2239 ntBASIC0.54□□□□□ -2.32
HLA-DQA1P01909 AL442644.1-201ENST00000454390 3105 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.4-201ENST00000362333 112 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 RNU6-1209P-201ENST00000363655 107 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.462-201ENST00000384268 102 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 RNU6-937P-201ENST00000384325 106 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.529-201ENST00000384586 119 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 MIR570-201ENST00000384917 97 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 SNORD89-201ENST00000390981 114 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 MIR1278-201ENST00000408753 81 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 RNU4-30P-201ENST00000410245 143 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.53□□□□□ -2.32
HLA-DQA1P01909 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 FABP5P4-201ENST00000437203 171 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 HMGN2P32-201ENST00000444648 269 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 SNORD19B-201ENST00000459623 84 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 NDUFA4P2-201ENST00000489989 244 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 RPL23AP54-201ENST00000495129 419 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.53□□□□□ -2.32
HLA-DQA1P01909 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.53□□□□□ -2.32
HLA-DQA1P01909 RNU7-115P-201ENST00000516433 55 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 RNU6-875P-201ENST00000516488 106 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 RNU7-110P-201ENST00000516891 62 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 RNU7-116P-201ENST00000516940 62 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.714-201ENST00000517065 90 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 AC036111.3-201ENST00000526389 112 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.772-201ENST00000606692 102 ntBASIC0.53□□□□□ -2.32
HLA-DQA1P01909 Y_RNA.58-201ENST00000362807 102 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.143-201ENST00000363520 106 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.154-201ENST00000363624 102 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 SNORD14E-201ENST00000364009 85 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 RNU6-1048P-201ENST00000364054 107 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.796-201ENST00000364268 102 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 RNU6-654P-201ENST00000364373 107 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 Y_RNA.799-201ENST00000364992 102 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 RNY3P1-201ENST00000365085 102 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 RNY3-201ENST00000365484 102 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 AL160004.2-201ENST00000432935 350 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 AL392103.1-201ENST00000447000 198 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 HMGN1P10-201ENST00000474557 553 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 AC082651.2-201ENST00000496833 166 ntBASIC0.52□□□□□ -2.33
HLA-DQA1P01909 FGF7P4-201ENST00000509595 295 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms