Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RNA5SP102-201ENST00000516865 106 ntBASIC2.64□□□□□ -1.99
RAPGEF3O95398 AC121758.2-201ENST00000553271 193 ntBASIC2.64□□□□□ -1.99
RAPGEF3O95398 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.64□□□□□ -1.99
RAPGEF3O95398 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.64□□□□□ -1.99
RAPGEF3O95398 Y_RNA.802-201ENST00000614892 130 ntBASIC2.64□□□□□ -1.99
RAPGEF3O95398 AC018630.2-201ENST00000534866 2403 ntBASIC2.63□□□□□ -1.99
RAPGEF3O95398 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RAPGEF3O95398 RNU6-1020P-201ENST00000363684 107 ntBASIC2.63□□□□□ -1.99
RAPGEF3O95398 SNORA8-201ENST00000384574 139 ntBASIC2.63□□□□□ -1.99
RAPGEF3O95398 SNORA8.3-201ENST00000384679 139 ntBASIC2.63□□□□□ -1.99
RAPGEF3O95398 AL021397.1-201ENST00000451806 248 ntBASIC2.63□□□□□ -1.99
RAPGEF3O95398 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.63□□□□□ -1.99
RAPGEF3O95398 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RAPGEF3O95398 AC069114.2-201ENST00000604699 304 ntBASIC2.63□□□□□ -1.99
RAPGEF3O95398 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.63□□□□□ -1.99
RAPGEF3O95398 AC012640.5-201ENST00000623897 319 ntBASIC2.63□□□□□ -1.99
RAPGEF3O95398 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RAPGEF3O95398 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
RAPGEF3O95398 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RAPGEF3O95398 SNORD114-26-201ENST00000363543 72 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 RNU6-674P-201ENST00000363831 107 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 RNU6-136P-201ENST00000384663 107 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 MIR597-201ENST00000384968 97 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RAPGEF3O95398 RPS4XP11-201ENST00000446897 772 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.62□□□□□ -1.99
RAPGEF3O95398 RNU1-123P-201ENST00000458950 160 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.62□□□□□ -1.99
RAPGEF3O95398 HMGN1P7-201ENST00000491722 313 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 RPL23AP54-201ENST00000495129 419 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 AL358944.1-201ENST00000528537 144 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 MIR4724-201ENST00000579485 89 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 AC098479.1-201ENST00000609225 154 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 MIR6779-201ENST00000617283 64 ntBASIC2.62□□□□□ -1.99
RAPGEF3O95398 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.62□□□□□ -1.99
RAPGEF3O95398 RNU6-1019P-201ENST00000364424 107 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 RNU4-17P-201ENST00000365598 141 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 Y_RNA.435-201ENST00000384095 112 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 MIR626-201ENST00000385032 94 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 AC069257.2-201ENST00000441819 155 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 RNA5SP220-201ENST00000516298 104 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 RNU6-341P-201ENST00000516973 96 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 RNU6-1096P-201ENST00000517089 102 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 SNORA31.25-201ENST00000517242 134 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.61□□□□□ -1.99
RAPGEF3O95398 AC091178.2-201ENST00000584401 117 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 AC004792.1-201ENST00000614523 137 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 MIR6079-201ENST00000635807 62 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 ZNF720P1-201ENST00000562403 1939 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RAPGEF3O95398 AC100821.1-201ENST00000523153 2479 ntBASIC2.61□□□□□ -1.99
RAPGEF3O95398 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RAPGEF3O95398 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.6□□□□□ -1.99
RAPGEF3O95398 AC245060.5-201ENST00000610778 3293 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RAPGEF3O95398 SNORA33-201ENST00000363664 130 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 RNU1-42P-201ENST00000364033 160 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 Y_RNA.308-201ENST00000365043 101 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 SNORD114-22-201ENST00000365423 72 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 MTND2P29-201ENST00000438595 412 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 AC009474.2-201ENST00000451383 136 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 RNU6-437P-201ENST00000459408 95 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 AL163195.1-201ENST00000496941 348 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.6□□□□□ -1.99
RAPGEF3O95398 AP002392.1-201ENST00000537692 208 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 U1.36-201ENST00000620684 176 ntBASIC2.6□□□□□ -1.99
RAPGEF3O95398 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.6□□□□□ -1.99
RAPGEF3O95398 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RAPGEF3O95398 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RAPGEF3O95398 MIRLET7G-201ENST00000362280 84 ntBASIC2.59□□□□□ -1.99
RAPGEF3O95398 MIR367-201ENST00000362299 68 ntBASIC2.59□□□□□ -1.99
RAPGEF3O95398 SNORA48.1-201ENST00000390879 135 ntBASIC2.59□□□□□ -1.99
RAPGEF3O95398 RNU7-120P-201ENST00000459334 63 ntBASIC2.59□□□□□ -1.99
RAPGEF3O95398 AC091021.1-201ENST00000468051 388 ntBASIC2.59□□□□□ -1.99
RAPGEF3O95398 AC011604.1-201ENST00000545978 196 ntBASIC2.59□□□□□ -1.99
RAPGEF3O95398 AC072026.1-201ENST00000605023 201 ntBASIC2.59□□□□□ -1.99
RAPGEF3O95398 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
RAPGEF3O95398 Y_RNA.121-201ENST00000363309 113 ntBASIC2.58□□□□□ -2
RAPGEF3O95398 RNU6-923P-201ENST00000364753 107 ntBASIC2.58□□□□□ -2
RAPGEF3O95398 MIR144-201ENST00000384886 86 ntBASIC2.58□□□□□ -2
RAPGEF3O95398 RNU6-918P-201ENST00000391219 106 ntBASIC2.58□□□□□ -2
RAPGEF3O95398 RN7SKP164-201ENST00000516138 266 ntBASIC2.58□□□□□ -2
RAPGEF3O95398 MIR2681-201ENST00000581814 105 ntBASIC2.58□□□□□ -2
RAPGEF3O95398 AC002984.1-201ENST00000591692 448 ntBASIC2.58□□□□□ -2
RAPGEF3O95398 AL078603.1-201ENST00000603824 313 ntBASIC2.58□□□□□ -2
RAPGEF3O95398 RNU6-493P-201ENST00000391321 108 ntBASIC2.57□□□□□ -2
RAPGEF3O95398 AC025033.1-201ENST00000463883 194 ntBASIC2.57□□□□□ -2
RAPGEF3O95398 AC079804.2-201ENST00000490376 200 ntBASIC2.57□□□□□ -2
RAPGEF3O95398 RNY3P16-201ENST00000516338 101 ntBASIC2.57□□□□□ -2
RAPGEF3O95398 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RAPGEF3O95398 AC008555.8-201ENST00000623602 2168 ntBASIC2.57□□□□□ -2
RAPGEF3O95398 AC068700.1-201ENST00000565862 3754 ntBASIC2.56□□□□□ -2
RAPGEF3O95398 Y_RNA.7-201ENST00000362352 102 ntBASIC2.56□□□□□ -2
RAPGEF3O95398 RNU6-103P-201ENST00000363686 107 ntBASIC2.56□□□□□ -2
RAPGEF3O95398 RNU6-60P-201ENST00000364792 103 ntBASIC2.56□□□□□ -2
RAPGEF3O95398 RNA5SP496-201ENST00000391240 109 ntBASIC2.56□□□□□ -2
RAPGEF3O95398 RNU6-381P-201ENST00000391259 108 ntBASIC2.56□□□□□ -2
RAPGEF3O95398 COX6CP10-201ENST00000416832 224 ntBASIC2.56□□□□□ -2
RAPGEF3O95398 PIGPP3-201ENST00000425307 415 ntBASIC2.56□□□□□ -2
RAPGEF3O95398 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms