Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.13□□□□□ -2.23
SIX3O95343 U8.19-201ENST00000459095 133 ntBASIC1.13□□□□□ -2.23
SIX3O95343 RNU6-1132P-201ENST00000459214 107 ntBASIC1.13□□□□□ -2.23
SIX3O95343 SNORD111.1-201ENST00000516421 86 ntBASIC1.13□□□□□ -2.23
SIX3O95343 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
SIX3O95343 AC022441.3-201ENST00000605737 136 ntBASIC1.13□□□□□ -2.23
SIX3O95343 AC011373.1-201ENST00000607270 237 ntBASIC1.13□□□□□ -2.23
SIX3O95343 Y_RNA.804-201ENST00000615262 101 ntBASIC1.13□□□□□ -2.23
SIX3O95343 AC027279.3-201ENST00000625055 122 ntBASIC1.13□□□□□ -2.23
SIX3O95343 Y_RNA.58-201ENST00000362807 102 ntBASIC1.12□□□□□ -2.23
SIX3O95343 Y_RNA.154-201ENST00000363624 102 ntBASIC1.12□□□□□ -2.23
SIX3O95343 Y_RNA.263-201ENST00000364659 114 ntBASIC1.12□□□□□ -2.23
SIX3O95343 RNY3P1-201ENST00000365085 102 ntBASIC1.12□□□□□ -2.23
SIX3O95343 RNY3-201ENST00000365484 102 ntBASIC1.12□□□□□ -2.23
SIX3O95343 Y_RNA.361-201ENST00000365515 120 ntBASIC1.12□□□□□ -2.23
SIX3O95343 Y_RNA.526-201ENST00000384572 110 ntBASIC1.12□□□□□ -2.23
SIX3O95343 RNU6-21P-201ENST00000384710 107 ntBASIC1.12□□□□□ -2.23
SIX3O95343 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
SIX3O95343 MCFD2P1-201ENST00000417812 300 ntBASIC1.12□□□□□ -2.23
SIX3O95343 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
SIX3O95343 AC245047.7-201ENST00000440265 293 ntBASIC1.12□□□□□ -2.23
SIX3O95343 AC093852.1-201ENST00000503587 266 ntBASIC1.12□□□□□ -2.23
SIX3O95343 RNU6-507P-201ENST00000516045 100 ntBASIC1.12□□□□□ -2.23
SIX3O95343 AC093027.1-201ENST00000546698 429 ntBASIC1.12□□□□□ -2.23
SIX3O95343 AC004832.4-201ENST00000608952 331 ntBASIC1.12□□□□□ -2.23
SIX3O95343 Y_RNA.274-201ENST00000364714 101 ntBASIC1.11□□□□□ -2.23
SIX3O95343 Y_RNA.341-201ENST00000365341 102 ntBASIC1.11□□□□□ -2.23
SIX3O95343 MIR802-201ENST00000390235 94 ntBASIC1.11□□□□□ -2.23
SIX3O95343 RNU6-131P-201ENST00000391144 107 ntBASIC1.11□□□□□ -2.23
SIX3O95343 RNA5SP127-201ENST00000411051 133 ntBASIC1.11□□□□□ -2.23
SIX3O95343 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.11□□□□□ -2.23
SIX3O95343 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.11□□□□□ -2.23
SIX3O95343 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.11□□□□□ -2.23
SIX3O95343 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.11□□□□□ -2.23
SIX3O95343 FGF7P4-201ENST00000509595 295 ntBASIC1.11□□□□□ -2.23
SIX3O95343 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.11□□□□□ -2.23
SIX3O95343 RNU6-976P-201ENST00000516086 111 ntBASIC1.11□□□□□ -2.23
SIX3O95343 AC027335.2-201ENST00000624030 375 ntBASIC1.11□□□□□ -2.23
SIX3O95343 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
SIX3O95343 Y_RNA.258-201ENST00000364613 105 ntBASIC1.1□□□□□ -2.23
SIX3O95343 snoU2-30.1-201ENST00000365012 70 ntBASIC1.1□□□□□ -2.23
SIX3O95343 Y_RNA.439-201ENST00000384119 94 ntBASIC1.1□□□□□ -2.23
SIX3O95343 SNORA72-201ENST00000384339 132 ntBASIC1.1□□□□□ -2.23
SIX3O95343 MIR516B2-201ENST00000385190 85 ntBASIC1.1□□□□□ -2.23
SIX3O95343 RNU6-1199P-201ENST00000411249 104 ntBASIC1.1□□□□□ -2.23
SIX3O95343 MTND1P14-201ENST00000427400 950 ntBASIC1.1□□□□□ -2.23
SIX3O95343 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.1□□□□□ -2.23
SIX3O95343 AC006157.1-201ENST00000611750 366 ntBASIC1.1□□□□□ -2.23
SIX3O95343 AC112487.2-201ENST00000637950 304 ntBASIC1.1□□□□□ -2.23
SIX3O95343 Y_RNA.172-201ENST00000363765 102 ntBASIC1.09□□□□□ -2.23
SIX3O95343 Y_RNA.253-201ENST00000364562 112 ntBASIC1.09□□□□□ -2.23
SIX3O95343 Y_RNA.570-201ENST00000384750 101 ntBASIC1.09□□□□□ -2.23
SIX3O95343 MIR526A1-201ENST00000384897 85 ntBASIC1.09□□□□□ -2.23
SIX3O95343 RNU6-1054P-201ENST00000411293 104 ntBASIC1.09□□□□□ -2.23
SIX3O95343 AC063976.4-201ENST00000421971 163 ntBASIC1.09□□□□□ -2.23
SIX3O95343 Y_RNA.713-201ENST00000517013 96 ntBASIC1.09□□□□□ -2.23
SIX3O95343 MIR5188-201ENST00000583467 113 ntBASIC1.09□□□□□ -2.23
SIX3O95343 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.09□□□□□ -2.23
SIX3O95343 AC104985.2-201ENST00000620598 500 ntBASIC1.09□□□□□ -2.23
SIX3O95343 AL606534.2-204ENST00000635008 178 ntBASIC1.09□□□□□ -2.23
SIX3O95343 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
SIX3O95343 RNU6-1115P-201ENST00000362490 106 ntBASIC1.08□□□□□ -2.24
SIX3O95343 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
SIX3O95343 MIR136-201ENST00000385207 82 ntBASIC1.08□□□□□ -2.24
SIX3O95343 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.08□□□□□ -2.24
SIX3O95343 MIR1298-201ENST00000408783 112 ntBASIC1.08□□□□□ -2.24
SIX3O95343 SNRPGP10-201ENST00000432323 225 ntBASIC1.08□□□□□ -2.24
SIX3O95343 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.08□□□□□ -2.24
SIX3O95343 RNU7-152P-201ENST00000458982 64 ntBASIC1.08□□□□□ -2.24
SIX3O95343 U8.20-201ENST00000459445 131 ntBASIC1.08□□□□□ -2.24
SIX3O95343 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.08□□□□□ -2.24
SIX3O95343 AC136932.1-201ENST00000574771 208 ntBASIC1.08□□□□□ -2.24
SIX3O95343 AL121655.1-201ENST00000605811 308 ntBASIC1.08□□□□□ -2.24
SIX3O95343 AL020996.3-201ENST00000606617 222 ntBASIC1.08□□□□□ -2.24
SIX3O95343 JPX_2.1-201ENST00000614161 69 ntBASIC1.08□□□□□ -2.24
SIX3O95343 AL442644.1-201ENST00000454390 3105 ntBASIC1.08□□□□□ -2.24
SIX3O95343 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SIX3O95343 U8.5-201ENST00000364528 136 ntBASIC1.07□□□□□ -2.24
SIX3O95343 Y_RNA.336-201ENST00000365307 109 ntBASIC1.07□□□□□ -2.24
SIX3O95343 RNU1-115P-201ENST00000365329 160 ntBASIC1.07□□□□□ -2.24
SIX3O95343 MT-TD-201ENST00000387419 68 ntBASIC1.07□□□□□ -2.24
SIX3O95343 HMGN2P32-201ENST00000444648 269 ntBASIC1.07□□□□□ -2.24
SIX3O95343 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
SIX3O95343 SNORA40.14-201ENST00000516543 86 ntBASIC1.07□□□□□ -2.24
SIX3O95343 SNORD45.4-201ENST00000516629 73 ntBASIC1.07□□□□□ -2.24
SIX3O95343 RNU7-116P-201ENST00000516940 62 ntBASIC1.07□□□□□ -2.24
SIX3O95343 POLR3GP1-201ENST00000594073 261 ntBASIC1.07□□□□□ -2.24
SIX3O95343 DEFB117-201ENST00000602356 141 ntBASIC1.07□□□□□ -2.24
SIX3O95343 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SIX3O95343 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SIX3O95343 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.07□□□□□ -2.24
SIX3O95343 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SIX3O95343 Y_RNA.252-201ENST00000364556 101 ntBASIC1.06□□□□□ -2.24
SIX3O95343 RNU6-716P-201ENST00000365621 103 ntBASIC1.06□□□□□ -2.24
SIX3O95343 Y_RNA.424-201ENST00000384063 103 ntBASIC1.06□□□□□ -2.24
SIX3O95343 Y_RNA.462-201ENST00000384268 102 ntBASIC1.06□□□□□ -2.24
SIX3O95343 MIR15B-201ENST00000385045 98 ntBASIC1.06□□□□□ -2.24
SIX3O95343 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
SIX3O95343 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.06□□□□□ -2.24
SIX3O95343 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms