Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 MTND4P29-201ENST00000503122 1372 ntBASIC1.13□□□□□ -2.23
CSDE1O75534 MIRLET7C-201ENST00000362160 84 ntBASIC1.13□□□□□ -2.23
CSDE1O75534 Y_RNA.61-201ENST00000362835 102 ntBASIC1.13□□□□□ -2.23
CSDE1O75534 Y_RNA.118-201ENST00000363300 101 ntBASIC1.13□□□□□ -2.23
CSDE1O75534 AL590004.1-201ENST00000405321 300 ntBASIC1.13□□□□□ -2.23
CSDE1O75534 RNU6-947P-201ENST00000516264 106 ntBASIC1.13□□□□□ -2.23
CSDE1O75534 RNU6-988P-201ENST00000519081 107 ntBASIC1.13□□□□□ -2.23
CSDE1O75534 GHRLOS.1-201ENST00000610995 70 ntBASIC1.13□□□□□ -2.23
CSDE1O75534 PART1_1.1-201ENST00000611761 217 ntBASIC1.13□□□□□ -2.23
CSDE1O75534 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.13□□□□□ -2.23
CSDE1O75534 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
CSDE1O75534 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CSDE1O75534 Y_RNA.122-201ENST00000363331 96 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 Y_RNA.148-201ENST00000363557 117 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 RNU6-450P-201ENST00000364654 107 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 SNORA2.2-201ENST00000365473 135 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 Y_RNA.389-201ENST00000383924 113 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 SNORD63-201ENST00000384262 68 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 MIR222-201ENST00000384992 110 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 MIR518E-201ENST00000385252 88 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 RNU6-101P-201ENST00000410323 104 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 POLR2KP2-201ENST00000438155 177 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 Y_RNA.631-201ENST00000459607 101 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 AC010655.3-201ENST00000478818 450 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 RNU6-917P-201ENST00000516294 104 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 AC090049.2-201ENST00000550377 109 ntBASIC1.12□□□□□ -2.23
CSDE1O75534 SNORD81.1-201ENST00000363064 77 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 Y_RNA.253-201ENST00000364562 112 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 SNORA70.7-201ENST00000384159 133 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 SNORA72-201ENST00000384339 132 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 Y_RNA.535-201ENST00000384612 99 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 RNU6-130P-201ENST00000411112 103 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 PMCHL1-202ENST00000423102 261 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 AL133373.1-201ENST00000497098 94 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 AC114811.1-201ENST00000507207 168 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 SEPT14P8-201ENST00000508026 178 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 RNU6-1046P-201ENST00000516538 107 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
CSDE1O75534 MIR376A1-201ENST00000616574 68 ntBASIC1.11□□□□□ -2.23
CSDE1O75534 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 RNU6-1084P-201ENST00000362498 107 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 Y_RNA.28-201ENST00000362554 111 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 RNU6-833P-201ENST00000363486 107 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 SNORA63.7-201ENST00000365579 123 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 Y_RNA.383-201ENST00000383855 97 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 Y_RNA.456-201ENST00000384232 111 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 RNU6-474P-201ENST00000384243 107 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 Y_RNA.604-201ENST00000410574 102 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 MTCO2P12-201ENST00000427426 682 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 RNU6-113P-201ENST00000516653 101 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 RNU7-116P-201ENST00000516940 62 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 Y_RNA.715-201ENST00000517082 110 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 POLR3GP1-201ENST00000594073 261 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 SNORD113-5-201ENST00000607261 78 ntBASIC1.1□□□□□ -2.23
CSDE1O75534 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
CSDE1O75534 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 MIR653-201ENST00000385279 96 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 SNORD41-201ENST00000386967 70 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 RNU6-131P-201ENST00000391144 107 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 Y_RNA.602-201ENST00000410535 92 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 RPL39P39-201ENST00000455840 151 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 U8.19-201ENST00000459095 133 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 RNU6-165P-201ENST00000517170 99 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.09□□□□□ -2.23
CSDE1O75534 AC136932.1-201ENST00000574771 208 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 AL078603.1-201ENST00000603824 313 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 AL357312.1-201ENST00000603879 298 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 BX284668.6-201ENST00000606899 438 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 AC027279.3-201ENST00000625055 122 ntBASIC1.09□□□□□ -2.23
CSDE1O75534 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.09□□□□□ -2.23
CSDE1O75534 RNU6-797P-201ENST00000363101 109 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 RNU4-80P-201ENST00000363200 141 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 Y_RNA.128-201ENST00000363391 112 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 Y_RNA.138-201ENST00000363462 102 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 SNORD113-8-201ENST00000363497 74 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 U8.5-201ENST00000364528 136 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 Y_RNA.286-201ENST00000364813 102 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 Y_RNA.310-201ENST00000365063 113 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 Y_RNA.368-201ENST00000365547 113 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 RNU6-1323P-201ENST00000384025 107 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 MIR489-201ENST00000384923 84 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 MIR452-201ENST00000385020 85 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 RNU6-823P-201ENST00000391042 103 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 Y_RNA.645-201ENST00000391229 102 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 MIR548P-201ENST00000408336 84 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 SNRPGP10-201ENST00000432323 225 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 AC117454.1-201ENST00000491120 168 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 RPL23AP54-201ENST00000495129 419 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 Y_RNA.714-201ENST00000517065 90 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 Y_RNA.721-201ENST00000517207 102 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.08□□□□□ -2.24
CSDE1O75534 RMST_2.1-201ENST00000617263 136 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 AC134503.1-201ENST00000633048 54 ntBASIC1.08□□□□□ -2.24
CSDE1O75534 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CSDE1O75534 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
CSDE1O75534 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms