Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SNORA64-201ENST00000384674 134 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 SNORA48.3-201ENST00000391081 134 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 RNU2-51P-201ENST00000410708 197 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
VAMP4O75379 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.77□□□□□ -1.97
VAMP4O75379 AC092991.1-201ENST00000477176 376 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 RN7SL429P-201ENST00000479090 223 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 RN7SL489P-201ENST00000486185 223 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 RN7SL327P-201ENST00000488659 223 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 RNA5SP82-201ENST00000516707 92 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 MIR3945-201ENST00000581853 98 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 AL031274.2-201ENST00000599419 203 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 AC097639.2-201ENST00000603159 172 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 RN7SL853P-201ENST00000617250 223 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 AP001340.1-201ENST00000624405 217 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 ZNF720P1-201ENST00000562403 1939 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 RNU6-1080P-201ENST00000383982 107 ntBASIC2.76□□□□□ -1.97
VAMP4O75379 SNORA26-201ENST00000391286 122 ntBASIC2.76□□□□□ -1.97
VAMP4O75379 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.76□□□□□ -1.97
VAMP4O75379 MIR4662B-201ENST00000579498 81 ntBASIC2.76□□□□□ -1.97
VAMP4O75379 MIR4298-201ENST00000584380 73 ntBASIC2.76□□□□□ -1.97
VAMP4O75379 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
VAMP4O75379 AC245884.12-201ENST00000615364 59 ntBASIC2.76□□□□□ -1.97
VAMP4O75379 MIR6079-201ENST00000635807 62 ntBASIC2.76□□□□□ -1.97
VAMP4O75379 RNU6-978P-201ENST00000364371 103 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 Y_RNA.251-201ENST00000364551 99 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 RNU6-1168P-201ENST00000390831 104 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 RNU6-588P-201ENST00000410281 105 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.75□□□□□ -1.97
VAMP4O75379 CST2P1-201ENST00000425770 87 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 AC245047.4-201ENST00000433189 144 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 RPS26P45-201ENST00000471748 340 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 TRBV12-1-201ENST00000479785 344 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 CYCSP26-201ENST00000534107 320 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 AC026271.5-201ENST00000577873 130 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 AC120024.3-201ENST00000603167 156 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.75□□□□□ -1.97
VAMP4O75379 JPX_2.1-201ENST00000614161 69 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 TUG1_4.1-201ENST00000619464 181 ntBASIC2.75□□□□□ -1.97
VAMP4O75379 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VAMP4O75379 AP006437.1-201ENST00000641440 3685 ntBASIC2.74□□□□□ -1.97
VAMP4O75379 RNU6-1164P-201ENST00000364428 107 ntBASIC2.74□□□□□ -1.97
VAMP4O75379 MIR539-201ENST00000365690 78 ntBASIC2.74□□□□□ -1.97
VAMP4O75379 Y_RNA.420-201ENST00000384043 110 ntBASIC2.74□□□□□ -1.97
VAMP4O75379 RNU7-94P-201ENST00000459576 63 ntBASIC2.74□□□□□ -1.97
VAMP4O75379 HMGN1P7-201ENST00000491722 313 ntBASIC2.74□□□□□ -1.97
VAMP4O75379 OR9P1P-201ENST00000496431 281 ntBASIC2.74□□□□□ -1.97
VAMP4O75379 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.74□□□□□ -1.97
VAMP4O75379 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VAMP4O75379 RNA5SP493-201ENST00000364115 91 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 Y_RNA.634-201ENST00000364811 113 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 SNORA6-201ENST00000384033 151 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 Y_RNA.542-201ENST00000384641 111 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.73□□□□□ -1.97
VAMP4O75379 YWHAEP4-201ENST00000505390 198 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 RNU6-313P-201ENST00000516317 112 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 RNU7-149P-201ENST00000516739 59 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 MIR3169-201ENST00000578032 83 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 MIR5694-201ENST00000581190 76 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 SNORD14A-201ENST00000606526 91 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 Pinc.1-201ENST00000616452 154 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.73□□□□□ -1.97
VAMP4O75379 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VAMP4O75379 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
VAMP4O75379 SNORA25.7-201ENST00000364375 127 ntBASIC2.72□□□□□ -1.97
VAMP4O75379 RNU2-70P-201ENST00000410718 179 ntBASIC2.72□□□□□ -1.97
VAMP4O75379 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.72□□□□□ -1.97
VAMP4O75379 AC008267.6-201ENST00000441664 139 ntBASIC2.72□□□□□ -1.97
VAMP4O75379 MIR6895-201ENST00000613497 78 ntBASIC2.72□□□□□ -1.97
VAMP4O75379 MIR6873-201ENST00000622788 63 ntBASIC2.72□□□□□ -1.97
VAMP4O75379 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
VAMP4O75379 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
VAMP4O75379 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
VAMP4O75379 AC005336.3-201ENST00000623833 2679 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 RNU6-1082P-201ENST00000364574 107 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 SNORA70B-201ENST00000384210 135 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 SNORA20-201ENST00000384662 132 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 MIR29C-201ENST00000385231 88 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 RNU6-1154P-201ENST00000391001 104 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 RNA5SP323-201ENST00000391094 133 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 SNORA11.4-201ENST00000408823 129 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 Y_RNA.621-201ENST00000411065 96 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 AC233266.1-201ENST00000454518 96 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 IGKV3-31-201ENST00000523109 329 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 MIR4648-201ENST00000580107 72 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 AC242852.1-201ENST00000612151 96 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 AC244015.1-201ENST00000622301 99 ntBASIC2.71□□□□□ -1.98
VAMP4O75379 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VAMP4O75379 Y_RNA.253-201ENST00000364562 112 ntBASIC2.7□□□□□ -1.98
VAMP4O75379 SNORA8-201ENST00000384574 139 ntBASIC2.7□□□□□ -1.98
VAMP4O75379 SNRPGP10-201ENST00000432323 225 ntBASIC2.7□□□□□ -1.98
VAMP4O75379 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VAMP4O75379 NDUFA4P2-201ENST00000489989 244 ntBASIC2.7□□□□□ -1.98
VAMP4O75379 AL163195.1-201ENST00000496941 348 ntBASIC2.7□□□□□ -1.98
VAMP4O75379 RNU6-1291P-201ENST00000516591 104 ntBASIC2.7□□□□□ -1.98
VAMP4O75379 MIR6132-201ENST00000622083 109 ntBASIC2.7□□□□□ -1.98
VAMP4O75379 MIR219B-201ENST00000637023 88 ntBASIC2.7□□□□□ -1.98
VAMP4O75379 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VAMP4O75379 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms