Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MTCO1P5-201ENST00000433573 344 ntBASIC1.23□□□□□ -2.21
SNX3O60493 U8.19-201ENST00000459095 133 ntBASIC1.23□□□□□ -2.21
SNX3O60493 snoU13.26-201ENST00000459452 105 ntBASIC1.23□□□□□ -2.21
SNX3O60493 RN7SL429P-201ENST00000479090 223 ntBASIC1.23□□□□□ -2.21
SNX3O60493 RN7SL489P-201ENST00000486185 223 ntBASIC1.23□□□□□ -2.21
SNX3O60493 RN7SL327P-201ENST00000488659 223 ntBASIC1.23□□□□□ -2.21
SNX3O60493 MRPS35P2-201ENST00000508242 191 ntBASIC1.23□□□□□ -2.21
SNX3O60493 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.23□□□□□ -2.21
SNX3O60493 RN7SL853P-201ENST00000617250 223 ntBASIC1.23□□□□□ -2.21
SNX3O60493 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
SNX3O60493 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SNX3O60493 Y_RNA.152-201ENST00000363578 100 ntBASIC1.22□□□□□ -2.21
SNX3O60493 RNU6-290P-201ENST00000365212 101 ntBASIC1.22□□□□□ -2.21
SNX3O60493 RNA5SP190-201ENST00000365222 118 ntBASIC1.22□□□□□ -2.21
SNX3O60493 AL451046.2-201ENST00000403074 277 ntBASIC1.22□□□□□ -2.21
SNX3O60493 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
SNX3O60493 RNU6-322P-201ENST00000516010 103 ntBASIC1.22□□□□□ -2.21
SNX3O60493 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SNX3O60493 AP003072.1-201ENST00000531740 145 ntBASIC1.22□□□□□ -2.21
SNX3O60493 GHRLOS.1-201ENST00000610995 70 ntBASIC1.22□□□□□ -2.21
SNX3O60493 RNU6-1084P-201ENST00000362498 107 ntBASIC1.21□□□□□ -2.22
SNX3O60493 SNORD50B-201ENST00000364995 70 ntBASIC1.21□□□□□ -2.22
SNX3O60493 RNU6-131P-201ENST00000391144 107 ntBASIC1.21□□□□□ -2.22
SNX3O60493 SNORA36B-201ENST00000410438 131 ntBASIC1.21□□□□□ -2.22
SNX3O60493 AC113618.1-201ENST00000416747 285 ntBASIC1.21□□□□□ -2.22
SNX3O60493 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
SNX3O60493 SNORD45.4-201ENST00000516629 73 ntBASIC1.21□□□□□ -2.22
SNX3O60493 AP003733.2-201ENST00000529409 171 ntBASIC1.21□□□□□ -2.22
SNX3O60493 AL161670.1-201ENST00000554348 137 ntBASIC1.21□□□□□ -2.22
SNX3O60493 FAM106DP-201ENST00000586416 501 ntBASIC1.21□□□□□ -2.22
SNX3O60493 AL645939.4-201ENST00000604495 135 ntBASIC1.21□□□□□ -2.22
SNX3O60493 MIR8065-201ENST00000620577 100 ntBASIC1.21□□□□□ -2.22
SNX3O60493 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
SNX3O60493 RNU6-763P-201ENST00000390865 106 ntBASIC1.2□□□□□ -2.22
SNX3O60493 SNORA67.5-201ENST00000391036 107 ntBASIC1.2□□□□□ -2.22
SNX3O60493 MTCO2P33-201ENST00000402100 465 ntBASIC1.2□□□□□ -2.22
SNX3O60493 MIR1298-201ENST00000408783 112 ntBASIC1.2□□□□□ -2.22
SNX3O60493 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.2□□□□□ -2.22
SNX3O60493 AC005357.1-201ENST00000588399 301 ntBASIC1.2□□□□□ -2.22
SNX3O60493 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.2□□□□□ -2.22
SNX3O60493 AC022140.2-201ENST00000623500 188 ntBASIC1.2□□□□□ -2.22
SNX3O60493 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SNX3O60493 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
SNX3O60493 Y_RNA.16-201ENST00000362421 102 ntBASIC1.19□□□□□ -2.22
SNX3O60493 RNU6-1209P-201ENST00000363655 107 ntBASIC1.19□□□□□ -2.22
SNX3O60493 Y_RNA.796-201ENST00000364268 102 ntBASIC1.19□□□□□ -2.22
SNX3O60493 Y_RNA.799-201ENST00000364992 102 ntBASIC1.19□□□□□ -2.22
SNX3O60493 snoU2-30.1-201ENST00000365012 70 ntBASIC1.19□□□□□ -2.22
SNX3O60493 MIR452-201ENST00000385020 85 ntBASIC1.19□□□□□ -2.22
SNX3O60493 MIR1278-201ENST00000408753 81 ntBASIC1.19□□□□□ -2.22
SNX3O60493 MTND5P22-201ENST00000458380 195 ntBASIC1.19□□□□□ -2.22
SNX3O60493 RNU6-437P-201ENST00000459408 95 ntBASIC1.19□□□□□ -2.22
SNX3O60493 RNU6-1143P-201ENST00000516125 104 ntBASIC1.19□□□□□ -2.22
SNX3O60493 RNU6-947P-201ENST00000516264 106 ntBASIC1.19□□□□□ -2.22
SNX3O60493 RNU2-31P-201ENST00000516954 155 ntBASIC1.19□□□□□ -2.22
SNX3O60493 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.19□□□□□ -2.22
SNX3O60493 Y_RNA.336-201ENST00000365307 109 ntBASIC1.18□□□□□ -2.22
SNX3O60493 RNU6-969P-201ENST00000383900 105 ntBASIC1.18□□□□□ -2.22
SNX3O60493 MIR516B2-201ENST00000385190 85 ntBASIC1.18□□□□□ -2.22
SNX3O60493 SNORA53-201ENST00000391141 249 ntBASIC1.18□□□□□ -2.22
SNX3O60493 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
SNX3O60493 AL731563.1-201ENST00000442202 214 ntBASIC1.18□□□□□ -2.22
SNX3O60493 SNORD13-201ENST00000459299 104 ntBASIC1.18□□□□□ -2.22
SNX3O60493 Y_RNA.637-201ENST00000459424 114 ntBASIC1.18□□□□□ -2.22
SNX3O60493 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.18□□□□□ -2.22
SNX3O60493 Y_RNA.714-201ENST00000517065 90 ntBASIC1.18□□□□□ -2.22
SNX3O60493 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
SNX3O60493 AL512605.2-201ENST00000592972 256 ntBASIC1.18□□□□□ -2.22
SNX3O60493 JPX_2.1-201ENST00000614161 69 ntBASIC1.18□□□□□ -2.22
SNX3O60493 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.18□□□□□ -2.22
SNX3O60493 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SNX3O60493 Y_RNA.84-201ENST00000363011 104 ntBASIC1.17□□□□□ -2.22
SNX3O60493 RNU6-674P-201ENST00000363831 107 ntBASIC1.17□□□□□ -2.22
SNX3O60493 RNU6-899P-201ENST00000363947 107 ntBASIC1.17□□□□□ -2.22
SNX3O60493 Y_RNA.326-201ENST00000365176 113 ntBASIC1.17□□□□□ -2.22
SNX3O60493 RNU6-326P-201ENST00000365480 107 ntBASIC1.17□□□□□ -2.22
SNX3O60493 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
SNX3O60493 MIR1261-201ENST00000408659 82 ntBASIC1.17□□□□□ -2.22
SNX3O60493 RPS29P28-201ENST00000446439 141 ntBASIC1.17□□□□□ -2.22
SNX3O60493 NDUFA4P2-201ENST00000489989 244 ntBASIC1.17□□□□□ -2.22
SNX3O60493 AC091959.1-201ENST00000495857 238 ntBASIC1.17□□□□□ -2.22
SNX3O60493 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
SNX3O60493 AL357312.1-201ENST00000603879 298 ntBASIC1.17□□□□□ -2.22
SNX3O60493 SNORA25.1-201ENST00000362326 128 ntBASIC1.16□□□□□ -2.22
SNX3O60493 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.16□□□□□ -2.22
SNX3O60493 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.16□□□□□ -2.22
SNX3O60493 AC090142.3-201ENST00000519012 385 ntBASIC1.16□□□□□ -2.22
SNX3O60493 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.16□□□□□ -2.22
SNX3O60493 AC037487.3-201ENST00000606668 112 ntBASIC1.16□□□□□ -2.22
SNX3O60493 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SNX3O60493 RNU6-694P-201ENST00000364071 147 ntBASIC1.15□□□□□ -2.23
SNX3O60493 Y_RNA.422-201ENST00000384054 114 ntBASIC1.15□□□□□ -2.23
SNX3O60493 RNU6-514P-201ENST00000384208 107 ntBASIC1.15□□□□□ -2.23
SNX3O60493 RNU6-662P-201ENST00000384253 104 ntBASIC1.15□□□□□ -2.23
SNX3O60493 RNU6-1109P-201ENST00000391187 107 ntBASIC1.15□□□□□ -2.23
SNX3O60493 HMGN2P32-201ENST00000444648 269 ntBASIC1.15□□□□□ -2.23
SNX3O60493 MTND4LP30-201ENST00000454092 297 ntBASIC1.15□□□□□ -2.23
SNX3O60493 AC048334.1-201ENST00000477975 159 ntBASIC1.15□□□□□ -2.23
SNX3O60493 AL133373.1-201ENST00000497098 94 ntBASIC1.15□□□□□ -2.23
SNX3O60493 SNORA31.2-201ENST00000516019 134 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms