Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 AC244015.1-201ENST00000622301 99 ntBASIC0.96□□□□□ -2.26
TRAF3IP2O43734 RNU6-833P-201ENST00000363486 107 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.143-201ENST00000363520 106 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.158-201ENST00000363651 101 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.172-201ENST00000363765 102 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 SNORA2.2-201ENST00000365473 135 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 RNU6-42P-201ENST00000384165 107 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 RNU6-136P-201ENST00000384663 107 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 MIR618-201ENST00000385287 98 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 SNORD115-46-201ENST00000390982 71 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 Z98949.2-201ENST00000440996 144 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 RNA5SP220-201ENST00000516298 104 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 AC090049.2-201ENST00000550377 109 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 AC019288.1-201ENST00000557918 224 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 AC020661.2-201ENST00000560114 134 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 MIR3664-201ENST00000579074 99 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 MIR4300-201ENST00000581016 96 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 AC120024.3-201ENST00000603167 156 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 AC104695.3-201ENST00000604052 296 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 AP003357.1-201ENST00000604497 148 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAF3IP2O43734 MIR376A1-201ENST00000616574 68 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 RMST_2.1-201ENST00000617263 136 ntBASIC0.95□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.138-201ENST00000363462 102 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.253-201ENST00000364562 112 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.341-201ENST00000365341 102 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 SNORA22B-201ENST00000383876 138 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.389-201ENST00000383924 113 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 RNU4-30P-201ENST00000410245 143 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 AL135790.2-201ENST00000437701 267 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 MTCYBP6-201ENST00000441810 138 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 MIR4778-201ENST00000577635 80 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 AL078603.1-201ENST00000603824 313 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 AL355297.3-201ENST00000604082 446 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 RAC1P9-201ENST00000604990 392 ntBASIC0.94□□□□□ -2.26
TRAF3IP2O43734 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAF3IP2O43734 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
TRAF3IP2O43734 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.136-201ENST00000363444 102 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.383-201ENST00000383855 97 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 RNU6-1080P-201ENST00000383982 107 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.455-201ENST00000384230 98 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
TRAF3IP2O43734 MIR891A-201ENST00000401237 79 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.93□□□□□ -2.26
TRAF3IP2O43734 POLR2KP2-201ENST00000438155 177 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 MTND4LP30-201ENST00000454092 297 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAF3IP2O43734 RNU6-322P-201ENST00000516010 103 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 RNU7-12P-201ENST00000516030 62 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 RNU6-897P-201ENST00000517135 105 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAF3IP2O43734 MIR3171-201ENST00000584270 74 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAF3IP2O43734 MIR4295-201ENST00000585286 85 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRAF3IP2O43734 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 GHRLOS.1-201ENST00000610995 70 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 AL591926.4-201ENST00000616895 298 ntBASIC0.93□□□□□ -2.26
TRAF3IP2O43734 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAF3IP2O43734 RNU4-90P-201ENST00000362773 141 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 SNORD113-8-201ENST00000363497 74 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.202-201ENST00000364083 110 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.581-201ENST00000391017 97 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 AL451046.2-201ENST00000403074 277 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 AL590004.1-201ENST00000405321 300 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.621-201ENST00000411065 96 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAF3IP2O43734 RPS29P28-201ENST00000446439 141 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 RNU6-496P-201ENST00000516145 99 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 RNU6-1046P-201ENST00000516538 107 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.701-201ENST00000516812 110 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 RN7SKP88-201ENST00000516847 250 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 AC127455.1-201ENST00000565496 145 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 AL357312.1-201ENST00000603879 298 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 7SK.8-201ENST00000612110 250 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 7SK.11-201ENST00000615477 250 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 7SK.13-201ENST00000622040 250 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAF3IP2O43734 AC068647.2-201ENST00000637380 353 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 AL442644.1-201ENST00000454390 3105 ntBASIC0.92□□□□□ -2.26
TRAF3IP2O43734 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.92□□□□□ -2.26
TRAF3IP2O43734 SNORD68-201ENST00000363214 84 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 RNU6-450P-201ENST00000364654 107 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 Y_RNA.286-201ENST00000364813 102 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 RNU6-969P-201ENST00000383900 105 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 MIR222-201ENST00000384992 110 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 MIR522-201ENST00000385071 87 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 SNORD41-201ENST00000386967 70 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAF3IP2O43734 AC104332.1-201ENST00000440471 797 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 HMGN2P32-201ENST00000444648 269 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 HSPE1P25-201ENST00000455484 251 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 AC010655.3-201ENST00000478818 450 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 RNU6-1143P-201ENST00000516125 104 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 RNU6-917P-201ENST00000516294 104 ntBASIC0.91□□□□□ -2.26
TRAF3IP2O43734 RNU7-115P-201ENST00000516433 55 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms