Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU6-705P-201ENST00000410601 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-860P-201ENST00000410860 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-785P-201ENST00000411324 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.19□□□□□ -2.44
SGCEO43556 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.19□□□□□ -2.44
SGCEO43556 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.19□□□□□ -2.44
SGCEO43556 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.19□□□□□ -2.44
SGCEO43556 RNU1-54P-201ENST00000517181 120 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 NBR2-204ENST00000587322 63 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 U6.90-201ENST00000614007 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 U6.70-201ENST00000620287 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 SNORA9.1-201ENST00000362412 131 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 SNORD114-26-201ENST00000363543 72 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 SNORA63C-201ENST00000364578 129 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 RNA5SP117-201ENST00000365294 118 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 RNU6-364P-201ENST00000384387 107 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 MIR802-201ENST00000390235 94 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
SGCEO43556 HMGN1P10-201ENST00000474557 553 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 RPL23AP54-201ENST00000495129 419 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 AC141557.1-201ENST00000540982 400 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.2□□□□□ -2.44
SGCEO43556 AC004467.1-201ENST00000615678 330 ntBASIC-0.2□□□□□ -2.44
SGCEO43556 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 RNU6-125P-201ENST00000384505 107 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 MIR610-201ENST00000385139 96 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 RNA5SP496-201ENST00000391240 109 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 AL031003.1-201ENST00000404229 172 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 RNU6-847P-201ENST00000411115 108 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 MTCO2P27-201ENST00000420740 428 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.21□□□□□ -2.44
SGCEO43556 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.21□□□□□ -2.44
SGCEO43556 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.21□□□□□ -2.44
SGCEO43556 RNA5SP268-201ENST00000516828 124 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 RNA5SP330-201ENST00000517096 96 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 AC145350.1-201ENST00000567426 208 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 AC121247.2-201ENST00000604776 136 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 AL359880.1-201ENST00000621879 266 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 AC124864.2-201ENST00000624736 186 ntBASIC-0.21□□□□□ -2.44
SGCEO43556 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.22□□□□□ -2.44
SGCEO43556 RNU6-318P-201ENST00000384283 103 ntBASIC-0.22□□□□□ -2.44
SGCEO43556 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.22□□□□□ -2.44
SGCEO43556 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.22□□□□□ -2.44
SGCEO43556 MIR644A-201ENST00000385262 94 ntBASIC-0.22□□□□□ -2.44
SGCEO43556 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.22□□□□□ -2.44
SGCEO43556 USP9YP30-201ENST00000430729 455 ntBASIC-0.22□□□□□ -2.44
SGCEO43556 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.22□□□□□ -2.44
SGCEO43556 RNU7-62P-201ENST00000458856 62 ntBASIC-0.22□□□□□ -2.44
SGCEO43556 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.22□□□□□ -2.44
SGCEO43556 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.22□□□□□ -2.44
SGCEO43556 RNU6-324P-201ENST00000363957 106 ntBASIC-0.23□□□□□ -2.45
SGCEO43556 RNU6-514P-201ENST00000384208 107 ntBASIC-0.23□□□□□ -2.45
SGCEO43556 RNU6-842P-201ENST00000384269 107 ntBASIC-0.23□□□□□ -2.45
SGCEO43556 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.23□□□□□ -2.45
SGCEO43556 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.23□□□□□ -2.45
SGCEO43556 RNU2-61P-201ENST00000411069 191 ntBASIC-0.23□□□□□ -2.45
SGCEO43556 MIR18B-201ENST00000454574 71 ntBASIC-0.23□□□□□ -2.45
SGCEO43556 SNORD5.1-201ENST00000458800 75 ntBASIC-0.23□□□□□ -2.45
SGCEO43556 AC105029.1-201ENST00000520250 669 ntBASIC-0.23□□□□□ -2.45
SGCEO43556 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.23□□□□□ -2.45
SGCEO43556 AC119751.7-201ENST00000600494 245 ntBASIC-0.23□□□□□ -2.45
SGCEO43556 MTND5P26-201ENST00000426018 1752 ntBASIC-0.24□□□□□ -2.45
SGCEO43556 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.24□□□□□ -2.45
SGCEO43556 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.24□□□□□ -2.45
SGCEO43556 MIR125B2-201ENST00000385128 89 ntBASIC-0.24□□□□□ -2.45
SGCEO43556 SNORD12B-201ENST00000410433 91 ntBASIC-0.24□□□□□ -2.45
SGCEO43556 MTND3P21-201ENST00000433774 331 ntBASIC-0.24□□□□□ -2.45
SGCEO43556 RPL17P19-201ENST00000489069 552 ntBASIC-0.24□□□□□ -2.45
SGCEO43556 RNU6-408P-201ENST00000515910 100 ntBASIC-0.24□□□□□ -2.45
SGCEO43556 SNORA18.4-201ENST00000516440 124 ntBASIC-0.24□□□□□ -2.45
SGCEO43556 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.24□□□□□ -2.45
SGCEO43556 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.24□□□□□ -2.45
SGCEO43556 SNORA72.1-201ENST00000363485 129 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 RNA5SP128-201ENST00000365305 116 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 RNU6-332P-201ENST00000391193 108 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 RNU6-192P-201ENST00000391253 100 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 RNU6-908P-201ENST00000410160 94 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.25□□□□□ -2.45
SGCEO43556 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 CHEK2P4-201ENST00000450340 246 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 RNU7-102P-201ENST00000458948 62 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 RNA5SP480-201ENST00000516840 109 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 RNU7-181P-201ENST00000517234 74 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 MIR6755-201ENST00000619993 66 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 AL391262.2-201ENST00000622466 494 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.25□□□□□ -2.45
SGCEO43556 SNORA36.1-201ENST00000363424 132 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 RNU6-268P-201ENST00000364174 107 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 MIR145-201ENST00000384967 88 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 PCNPP3-201ENST00000393579 471 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 SNRPGP14-201ENST00000435400 219 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.26□□□□□ -2.45
SGCEO43556 snoU13.16-201ENST00000459350 104 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.26□□□□□ -2.45
SGCEO43556 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms