Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC073349.3-201ENST00000617616 186 ntBASIC1.87□□□□□ -2.11
PCDH17O14917 snoU18.1-201ENST00000629629 71 ntBASIC1.87□□□□□ -2.11
PCDH17O14917 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
PCDH17O14917 MIR367-201ENST00000362299 68 ntBASIC1.86□□□□□ -2.11
PCDH17O14917 RNU6-1123P-201ENST00000362347 106 ntBASIC1.86□□□□□ -2.11
PCDH17O14917 RNU6-674P-201ENST00000363831 107 ntBASIC1.86□□□□□ -2.11
PCDH17O14917 Y_RNA.307-201ENST00000365022 117 ntBASIC1.86□□□□□ -2.11
PCDH17O14917 RNU6-211P-201ENST00000384047 107 ntBASIC1.86□□□□□ -2.11
PCDH17O14917 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PCDH17O14917 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PCDH17O14917 AC107393.1-201ENST00000512403 346 ntBASIC1.86□□□□□ -2.11
PCDH17O14917 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.86□□□□□ -2.11
PCDH17O14917 Y_RNA.676-201ENST00000516393 96 ntBASIC1.86□□□□□ -2.11
PCDH17O14917 AC021506.2-201ENST00000612354 169 ntBASIC1.86□□□□□ -2.11
PCDH17O14917 AL513423.1-201ENST00000621695 132 ntBASIC1.86□□□□□ -2.11
PCDH17O14917 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
PCDH17O14917 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PCDH17O14917 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
PCDH17O14917 Y_RNA.117-201ENST00000363294 101 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 SNORD27-201ENST00000363981 72 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 Y_RNA.253-201ENST00000364562 112 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 Y_RNA.277-201ENST00000364754 102 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 Y_RNA.293-201ENST00000364908 93 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 Y_RNA.447-201ENST00000384184 113 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 MIR583-201ENST00000384846 75 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 MIR30A-201ENST00000385092 71 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 RPL31P63-201ENST00000422565 375 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 PGBD4P5-201ENST00000445958 426 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 HMGN1P7-201ENST00000491722 313 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.85□□□□□ -2.11
PCDH17O14917 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
PCDH17O14917 Y_RNA.188-201ENST00000363952 111 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 U8.5-201ENST00000364528 136 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 SNORA20.1-201ENST00000364790 130 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 RNU6-439P-201ENST00000384188 106 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 Y_RNA.477-201ENST00000384352 108 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.84□□□□□ -2.11
PCDH17O14917 CYCSP49-201ENST00000420810 319 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 OR9P1P-201ENST00000496431 281 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.84□□□□□ -2.11
PCDH17O14917 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 RNU6-1007P-201ENST00000516586 107 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 MIR4724-201ENST00000579485 89 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 MIR5688-201ENST00000580619 83 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 MIR3128-201ENST00000581957 66 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 MIR4282-201ENST00000583613 67 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 AC087685.1-201ENST00000587507 141 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 AP000942.3-201ENST00000603702 160 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 AC103810.8-201ENST00000607347 118 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 Y_RNA.802-201ENST00000614892 130 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 AL591926.4-201ENST00000616895 298 ntBASIC1.84□□□□□ -2.11
PCDH17O14917 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
PCDH17O14917 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.84□□□□□ -2.12
PCDH17O14917 MIR126-201ENST00000362291 85 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 Y_RNA.122-201ENST00000363331 96 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 RNU4-41P-201ENST00000364426 143 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 MT-TG-201ENST00000387429 68 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 MIR526A2-201ENST00000390198 65 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 SUMO2P12-201ENST00000405924 140 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.83□□□□□ -2.12
PCDH17O14917 AC023449.1-201ENST00000454464 154 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.83□□□□□ -2.12
PCDH17O14917 MTND1P19-201ENST00000511780 315 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 RNU4-71P-201ENST00000516258 113 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
PCDH17O14917 AC006006.1-201ENST00000603082 144 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 AL442067.1-201ENST00000613261 223 ntBASIC1.83□□□□□ -2.12
PCDH17O14917 MIR424-201ENST00000362227 98 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 Y_RNA.60-201ENST00000362831 98 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 RNU1-17P-201ENST00000363022 152 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 SNORD68-201ENST00000363214 84 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 Y_RNA.242-201ENST00000364473 110 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 SNORA8.3-201ENST00000384679 139 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 RNU6-131P-201ENST00000391144 107 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 SNRPGP10-201ENST00000432323 225 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 AC099513.1-201ENST00000490423 301 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 CYCTP-201ENST00000504253 315 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 Y_RNA.673-201ENST00000516306 88 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 Y_RNA.680-201ENST00000516441 93 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 MIR4762-201ENST00000585261 75 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
PCDH17O14917 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PCDH17O14917 Y_RNA.304-201ENST00000365011 112 ntBASIC1.81□□□□□ -2.12
PCDH17O14917 RNU6-969P-201ENST00000383900 105 ntBASIC1.81□□□□□ -2.12
PCDH17O14917 RNU6-424P-201ENST00000384367 105 ntBASIC1.81□□□□□ -2.12
PCDH17O14917 MIR660-201ENST00000385235 97 ntBASIC1.81□□□□□ -2.12
PCDH17O14917 RNU6-1271P-201ENST00000517049 105 ntBASIC1.81□□□□□ -2.12
PCDH17O14917 AC110588.1-201ENST00000559699 137 ntBASIC1.81□□□□□ -2.12
PCDH17O14917 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
PCDH17O14917 Y_RNA.140-201ENST00000363474 103 ntBASIC1.8□□□□□ -2.12
PCDH17O14917 Y_RNA.338-201ENST00000365320 114 ntBASIC1.8□□□□□ -2.12
PCDH17O14917 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.8□□□□□ -2.12
PCDH17O14917 SNORA12.1-201ENST00000390873 148 ntBASIC1.8□□□□□ -2.12
PCDH17O14917 RNA5SP496-201ENST00000391240 109 ntBASIC1.8□□□□□ -2.12
PCDH17O14917 SNORD58.1-201ENST00000391313 66 ntBASIC1.8□□□□□ -2.12
PCDH17O14917 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms