Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SNORD12-201ENST00000391002 90 ntBASIC0.92□□□□□ -2.26
CUX2O14529 AC063976.4-201ENST00000421971 163 ntBASIC0.92□□□□□ -2.26
CUX2O14529 PIGPP3-201ENST00000425307 415 ntBASIC0.92□□□□□ -2.26
CUX2O14529 AL162725.1-201ENST00000435405 301 ntBASIC0.92□□□□□ -2.26
CUX2O14529 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.92□□□□□ -2.26
CUX2O14529 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.92□□□□□ -2.26
CUX2O14529 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.92□□□□□ -2.26
CUX2O14529 RNU6-120P-201ENST00000516077 103 ntBASIC0.92□□□□□ -2.26
CUX2O14529 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.92□□□□□ -2.26
CUX2O14529 PRELID3BP2-201ENST00000605362 201 ntBASIC0.92□□□□□ -2.26
CUX2O14529 SNORD41-201ENST00000386967 70 ntBASIC0.91□□□□□ -2.26
CUX2O14529 Y_RNA.592-201ENST00000410274 109 ntBASIC0.91□□□□□ -2.26
CUX2O14529 RPEP5-201ENST00000441137 268 ntBASIC0.91□□□□□ -2.26
CUX2O14529 FCF1P4-201ENST00000448326 183 ntBASIC0.91□□□□□ -2.26
CUX2O14529 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.91□□□□□ -2.26
CUX2O14529 RNU7-4P-201ENST00000516961 62 ntBASIC0.91□□□□□ -2.26
CUX2O14529 AC004817.2-201ENST00000561794 651 ntBASIC0.91□□□□□ -2.26
CUX2O14529 AC025253.1-201ENST00000613623 543 ntBASIC0.91□□□□□ -2.26
CUX2O14529 Y_RNA.646-201ENST00000410980 101 ntBASIC0.9□□□□□ -2.27
CUX2O14529 RNU6-370P-201ENST00000411008 104 ntBASIC0.9□□□□□ -2.27
CUX2O14529 RNU6-1304P-201ENST00000411374 106 ntBASIC0.9□□□□□ -2.27
CUX2O14529 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.9□□□□□ -2.27
CUX2O14529 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.9□□□□□ -2.27
CUX2O14529 RPL30P15-201ENST00000457129 321 ntBASIC0.9□□□□□ -2.27
CUX2O14529 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.9□□□□□ -2.27
CUX2O14529 AC114811.1-201ENST00000507207 168 ntBASIC0.9□□□□□ -2.27
CUX2O14529 TPTEP1-208ENST00000636884 213 ntBASIC0.9□□□□□ -2.27
CUX2O14529 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
CUX2O14529 Y_RNA.314-201ENST00000365114 102 ntBASIC0.89□□□□□ -2.27
CUX2O14529 Y_RNA.363-201ENST00000365529 113 ntBASIC0.89□□□□□ -2.27
CUX2O14529 RNU6-310P-201ENST00000384655 107 ntBASIC0.89□□□□□ -2.27
CUX2O14529 CYCTP-201ENST00000504253 315 ntBASIC0.89□□□□□ -2.27
CUX2O14529 AC005176.2-201ENST00000596933 147 ntBASIC0.89□□□□□ -2.27
CUX2O14529 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.89□□□□□ -2.27
CUX2O14529 RNU6-1188P-201ENST00000363795 107 ntBASIC0.88□□□□□ -2.27
CUX2O14529 SNORD81.2-201ENST00000365153 76 ntBASIC0.88□□□□□ -2.27
CUX2O14529 RNU6-20P-201ENST00000384106 107 ntBASIC0.88□□□□□ -2.27
CUX2O14529 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
CUX2O14529 MIR1298-201ENST00000408783 112 ntBASIC0.88□□□□□ -2.27
CUX2O14529 RNU2-54P-201ENST00000410299 190 ntBASIC0.88□□□□□ -2.27
CUX2O14529 MRPS18CP6-201ENST00000423587 223 ntBASIC0.88□□□□□ -2.27
CUX2O14529 RNU7-90P-201ENST00000459216 62 ntBASIC0.88□□□□□ -2.27
CUX2O14529 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
CUX2O14529 Y_RNA.691-201ENST00000516611 103 ntBASIC0.88□□□□□ -2.27
CUX2O14529 RNU2-12P-201ENST00000517216 168 ntBASIC0.88□□□□□ -2.27
CUX2O14529 AC120024.3-201ENST00000603167 156 ntBASIC0.88□□□□□ -2.27
CUX2O14529 AC005972.2-201ENST00000604690 348 ntBASIC0.88□□□□□ -2.27
CUX2O14529 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CUX2O14529 MIR6718-201ENST00000616153 80 ntBASIC0.88□□□□□ -2.27
CUX2O14529 Pinc.1-201ENST00000616452 154 ntBASIC0.88□□□□□ -2.27
CUX2O14529 Y_RNA.101-201ENST00000363154 102 ntBASIC0.87□□□□□ -2.27
CUX2O14529 Y_RNA.166-201ENST00000363730 102 ntBASIC0.87□□□□□ -2.27
CUX2O14529 Y_RNA.279-201ENST00000364763 95 ntBASIC0.87□□□□□ -2.27
CUX2O14529 SNORA75.6-201ENST00000391318 127 ntBASIC0.87□□□□□ -2.27
CUX2O14529 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.87□□□□□ -2.27
CUX2O14529 Y_RNA.653-201ENST00000459091 95 ntBASIC0.87□□□□□ -2.27
CUX2O14529 Y_RNA.714-201ENST00000517065 90 ntBASIC0.87□□□□□ -2.27
CUX2O14529 AC022616.4-201ENST00000522985 181 ntBASIC0.87□□□□□ -2.27
CUX2O14529 AC133104.2-201ENST00000615272 193 ntBASIC0.87□□□□□ -2.27
CUX2O14529 AC240442.1-201ENST00000616055 283 ntBASIC0.87□□□□□ -2.27
CUX2O14529 AC022306.2-201ENST00000617563 647 ntBASIC0.87□□□□□ -2.27
CUX2O14529 SNORD115-30-201ENST00000364117 82 ntBASIC0.86□□□□□ -2.27
CUX2O14529 RNU1-36P-201ENST00000365130 165 ntBASIC0.86□□□□□ -2.27
CUX2O14529 RNU6-30P-201ENST00000384561 107 ntBASIC0.86□□□□□ -2.27
CUX2O14529 MIR136-201ENST00000385207 82 ntBASIC0.86□□□□□ -2.27
CUX2O14529 MIR942-201ENST00000401111 86 ntBASIC0.86□□□□□ -2.27
CUX2O14529 AL031003.1-201ENST00000404229 172 ntBASIC0.86□□□□□ -2.27
CUX2O14529 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.86□□□□□ -2.27
CUX2O14529 U8.19-201ENST00000459095 133 ntBASIC0.86□□□□□ -2.27
CUX2O14529 SNORD124-201ENST00000459577 104 ntBASIC0.86□□□□□ -2.27
CUX2O14529 MTND4P17-201ENST00000470444 350 ntBASIC0.86□□□□□ -2.27
CUX2O14529 RPS26P48-201ENST00000491713 339 ntBASIC0.86□□□□□ -2.27
CUX2O14529 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.86□□□□□ -2.27
CUX2O14529 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CUX2O14529 Y_RNA.248-201ENST00000364501 109 ntBASIC0.86□□□□□ -2.27
CUX2O14529 RNY3P4-201ENST00000384428 101 ntBASIC0.86□□□□□ -2.27
CUX2O14529 Y_RNA.619-201ENST00000410951 90 ntBASIC0.86□□□□□ -2.27
CUX2O14529 PDCL2P1-201ENST00000419302 352 ntBASIC0.86□□□□□ -2.27
CUX2O14529 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.86□□□□□ -2.27
CUX2O14529 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.86□□□□□ -2.27
CUX2O14529 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.86□□□□□ -2.27
CUX2O14529 RNU6-436P-201ENST00000516171 114 ntBASIC0.86□□□□□ -2.27
CUX2O14529 AC090142.3-201ENST00000519012 385 ntBASIC0.86□□□□□ -2.27
CUX2O14529 MIR4659A-201ENST00000580269 81 ntBASIC0.86□□□□□ -2.27
CUX2O14529 AC113139.1-201ENST00000605049 239 ntBASIC0.86□□□□□ -2.27
CUX2O14529 AL591926.4-201ENST00000616895 298 ntBASIC0.86□□□□□ -2.27
CUX2O14529 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.85□□□□□ -2.27
CUX2O14529 Y_RNA.446-201ENST00000384178 104 ntBASIC0.85□□□□□ -2.27
CUX2O14529 MIR526A1-201ENST00000384897 85 ntBASIC0.85□□□□□ -2.27
CUX2O14529 MIR520C-201ENST00000385005 87 ntBASIC0.85□□□□□ -2.27
CUX2O14529 MIR452-201ENST00000385020 85 ntBASIC0.85□□□□□ -2.27
CUX2O14529 MTND1P2-201ENST00000430604 821 ntBASIC0.85□□□□□ -2.27
CUX2O14529 RNU6-559P-201ENST00000516151 98 ntBASIC0.85□□□□□ -2.27
CUX2O14529 AC055872.1-201ENST00000570978 278 ntBASIC0.85□□□□□ -2.27
CUX2O14529 RNU6-490P-201ENST00000362985 107 ntBASIC0.84□□□□□ -2.28
CUX2O14529 RNY3P11-201ENST00000364153 102 ntBASIC0.84□□□□□ -2.28
CUX2O14529 Y_RNA.330-201ENST00000365230 109 ntBASIC0.84□□□□□ -2.28
CUX2O14529 SNORD78.2-201ENST00000391076 69 ntBASIC0.84□□□□□ -2.28
CUX2O14529 AC006461.1-201ENST00000412637 326 ntBASIC0.84□□□□□ -2.28
CUX2O14529 RNU7-21P-201ENST00000459430 62 ntBASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms