Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MTCO3P38-201ENST00000468910 766 ntBASIC-1.29□□□□□ -2.62
HMGN4O00479 AC011352.1-201ENST00000512300 793 ntBASIC-1.29□□□□□ -2.62
HMGN4O00479 SNORD27.1-201ENST00000516319 72 ntBASIC-1.29□□□□□ -2.62
HMGN4O00479 RNU6-410P-201ENST00000517006 107 ntBASIC-1.29□□□□□ -2.62
HMGN4O00479 AC072046.2-201ENST00000618366 268 ntBASIC-1.29□□□□□ -2.62
HMGN4O00479 Z97988.1-201ENST00000637697 135 ntBASIC-1.29□□□□□ -2.62
HMGN4O00479 RNU4-36P-201ENST00000364294 144 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 MIR204-201ENST00000385200 110 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 MIR516B1-201ENST00000385211 90 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.3□□□□□ -2.62
HMGN4O00479 MTATP6P14-201ENST00000455189 673 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.3□□□□□ -2.62
HMGN4O00479 AP003072.1-201ENST00000531740 145 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.3□□□□□ -2.62
HMGN4O00479 UBL5P4-201ENST00000562584 236 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 PIGPP4-201ENST00000584447 307 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 AC005771.1-201ENST00000585581 349 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 AC009248.2-201ENST00000619826 254 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 AC126544.2-201ENST00000625174 749 ntBASIC-1.3□□□□□ -2.62
HMGN4O00479 RNU6-490P-201ENST00000362985 107 ntBASIC-1.31□□□□□ -2.62
HMGN4O00479 RNU6-442P-201ENST00000383968 104 ntBASIC-1.31□□□□□ -2.62
HMGN4O00479 RNU6-926P-201ENST00000384075 107 ntBASIC-1.31□□□□□ -2.62
HMGN4O00479 RNU6-708P-201ENST00000384217 107 ntBASIC-1.31□□□□□ -2.62
HMGN4O00479 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.31□□□□□ -2.62
HMGN4O00479 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.31□□□□□ -2.62
HMGN4O00479 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.31□□□□□ -2.62
HMGN4O00479 SNORA25.13-201ENST00000516395 103 ntBASIC-1.31□□□□□ -2.62
HMGN4O00479 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.31□□□□□ -2.62
HMGN4O00479 MIR8055-201ENST00000610739 97 ntBASIC-1.31□□□□□ -2.62
HMGN4O00479 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.31□□□□□ -2.62
HMGN4O00479 AL596211.1-201ENST00000569873 2277 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 RNU6-403P-201ENST00000363163 104 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 RNU6-74P-201ENST00000384235 107 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 RNU6-541P-201ENST00000384709 110 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 SNORD110-201ENST00000408189 75 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 MTND1P14-201ENST00000427400 950 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 Z82188.1-201ENST00000436709 154 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 RPL30P10-201ENST00000488148 337 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.32□□□□□ -2.62
HMGN4O00479 AC090616.2-202ENST00000584248 222 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 AL133255.1-201ENST00000606374 441 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 U2.17-201ENST00000611454 95 ntBASIC-1.32□□□□□ -2.62
HMGN4O00479 RNU6-268P-201ENST00000364174 107 ntBASIC-1.33□□□□□ -2.62
HMGN4O00479 RNU6-606P-201ENST00000384721 111 ntBASIC-1.33□□□□□ -2.62
HMGN4O00479 MIR521-1-201ENST00000384902 87 ntBASIC-1.33□□□□□ -2.62
HMGN4O00479 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.33□□□□□ -2.62
HMGN4O00479 BX276092.1-201ENST00000427368 251 ntBASIC-1.33□□□□□ -2.62
HMGN4O00479 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.33□□□□□ -2.62
HMGN4O00479 snoU13.11-201ENST00000459219 104 ntBASIC-1.33□□□□□ -2.62
HMGN4O00479 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.33□□□□□ -2.62
HMGN4O00479 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.33□□□□□ -2.62
HMGN4O00479 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.33□□□□□ -2.62
HMGN4O00479 AC087588.2-201ENST00000617667 426 ntBASIC-1.33□□□□□ -2.62
HMGN4O00479 AL049777.1-201ENST00000622740 518 ntBASIC-1.33□□□□□ -2.62
HMGN4O00479 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.34□□□□□ -2.62
HMGN4O00479 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.34□□□□□ -2.62
HMGN4O00479 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.34□□□□□ -2.62
HMGN4O00479 MTATP6P18-201ENST00000417994 673 ntBASIC-1.34□□□□□ -2.62
HMGN4O00479 AC108059.2-201ENST00000434626 151 ntBASIC-1.34□□□□□ -2.62
HMGN4O00479 AL500527.2-201ENST00000454105 95 ntBASIC-1.34□□□□□ -2.62
HMGN4O00479 MTND1P24-201ENST00000552175 861 ntBASIC-1.34□□□□□ -2.62
HMGN4O00479 MTND5P34-201ENST00000568888 325 ntBASIC-1.34□□□□□ -2.62
HMGN4O00479 CPDP1-201ENST00000579660 283 ntBASIC-1.34□□□□□ -2.62
HMGN4O00479 AC018462.2-201ENST00000605375 395 ntBASIC-1.34□□□□□ -2.62
HMGN4O00479 AC009878.1-201ENST00000621819 340 ntBASIC-1.34□□□□□ -2.62
HMGN4O00479 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.34□□□□□ -2.62
HMGN4O00479 RNU6-10P-201ENST00000384036 107 ntBASIC-1.35□□□□□ -2.63
HMGN4O00479 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.35□□□□□ -2.63
HMGN4O00479 RNU6-455P-201ENST00000384681 107 ntBASIC-1.35□□□□□ -2.63
HMGN4O00479 RNU6-602P-201ENST00000411155 105 ntBASIC-1.35□□□□□ -2.63
HMGN4O00479 AC006210.1-201ENST00000424882 111 ntBASIC-1.35□□□□□ -2.63
HMGN4O00479 RNU7-67P-201ENST00000459003 62 ntBASIC-1.35□□□□□ -2.63
HMGN4O00479 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.35□□□□□ -2.63
HMGN4O00479 RNA5SP470-201ENST00000516463 106 ntBASIC-1.35□□□□□ -2.63
HMGN4O00479 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.35□□□□□ -2.63
HMGN4O00479 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 RNY4P3-201ENST00000365254 95 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 SNORD12C-201ENST00000386307 89 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 AL590002.1-201ENST00000406554 418 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 RNA5SP118-201ENST00000410385 109 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 MTATP6P20-201ENST00000414147 562 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 AC104850.1-201ENST00000435940 476 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 RPL39P25-201ENST00000449384 154 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 RNU6-274P-201ENST00000459566 107 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 AC131281.1-201ENST00000522984 164 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 MIR378F-201ENST00000578143 78 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 MIR4499-201ENST00000584834 69 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 uc_338.19-201ENST00000616808 99 ntBASIC-1.36□□□□□ -2.63
HMGN4O00479 RNU6-931P-201ENST00000363850 107 ntBASIC-1.37□□□□□ -2.63
HMGN4O00479 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.37□□□□□ -2.63
HMGN4O00479 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.37□□□□□ -2.63
HMGN4O00479 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms