Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 Y_RNA.376-201ENST00000365638 108 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 RNU6-310P-201ENST00000384655 107 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 MIR140-201ENST00000385282 100 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 MIR802-201ENST00000390235 94 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 U8.17-201ENST00000391292 132 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 SNRPGP14-201ENST00000435400 219 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 MTND1P34-201ENST00000438556 671 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.31□□□□□ -2.36
SMKR1H3BMG3 RNU6-470P-201ENST00000515954 104 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 RNU6-911P-201ENST00000516523 104 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 Y_RNA.691-201ENST00000516611 103 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.31□□□□□ -2.36
SMKR1H3BMG3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.31□□□□□ -2.36
SMKR1H3BMG3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.31□□□□□ -2.36
SMKR1H3BMG3 MIR5690-201ENST00000583739 73 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.31□□□□□ -2.36
SMKR1H3BMG3 RNU6-1188P-201ENST00000363795 107 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 RNU6-392P-201ENST00000364926 101 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 RNU6-580P-201ENST00000365159 107 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 RNY1P8-201ENST00000383970 114 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 SNORA51.10-201ENST00000384418 136 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 MIR570-201ENST00000384917 97 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 MIR573-201ENST00000384964 99 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 RNU6-370P-201ENST00000411008 104 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 AC005042.3-201ENST00000453230 174 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 RNU6-229P-201ENST00000516614 102 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 AP003357.1-201ENST00000604497 148 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 RMST_2.1-201ENST00000617263 136 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 U2.1-201ENST00000618978 145 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 TPTEP1-208ENST00000636884 213 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 AC073869.6-201ENST00000640656 341 ntBASIC0.3□□□□□ -2.36
SMKR1H3BMG3 MIR377-201ENST00000362145 69 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 MIR96-201ENST00000362288 78 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 RNU6-369P-201ENST00000362515 102 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 RNY3P11-201ENST00000364153 102 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 RNU6-268P-201ENST00000364174 107 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 RNU6-1175P-201ENST00000365200 107 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 MT-TN-201ENST00000387400 73 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 AC114737.2-201ENST00000421583 173 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 AC244023.1-201ENST00000426884 112 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.29□□□□□ -2.36
SMKR1H3BMG3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
SMKR1H3BMG3 MTND4P17-201ENST00000470444 350 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 HMGN1P10-201ENST00000474557 553 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 AC024405.2-202ENST00000532731 184 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 MIR548AO-201ENST00000579992 96 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 MIR5188-201ENST00000583467 113 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.29□□□□□ -2.36
SMKR1H3BMG3 AC242498.1-201ENST00000604134 111 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 AC243994.1-201ENST00000618627 109 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 AC015726.2-201ENST00000620112 122 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 AL359757.2-201ENST00000624309 274 ntBASIC0.29□□□□□ -2.36
SMKR1H3BMG3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.29□□□□□ -2.36
SMKR1H3BMG3 Y_RNA.27-201ENST00000362540 103 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 RNU6-845P-201ENST00000362578 103 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 RNU6-890P-201ENST00000384121 107 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 Y_RNA.570-201ENST00000384750 101 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 MIR628-201ENST00000385229 95 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.28□□□□□ -2.36
SMKR1H3BMG3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 RPL23AP54-201ENST00000495129 419 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 RNU4-57P-201ENST00000515980 135 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 RNU7-115P-201ENST00000516433 55 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.28□□□□□ -2.36
SMKR1H3BMG3 MIR4791-201ENST00000607666 84 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 MTND1P7-201ENST00000632801 297 ntBASIC0.28□□□□□ -2.36
SMKR1H3BMG3 AC068700.1-201ENST00000565862 3754 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.166-201ENST00000363730 102 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.314-201ENST00000365114 102 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 RNU6-934P-201ENST00000365154 107 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 SNORA1.2-201ENST00000365189 134 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 RNU4-45P-201ENST00000365469 141 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 RNU6-342P-201ENST00000384521 104 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 MTCO2P33-201ENST00000402100 465 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 Y_RNA.599-201ENST00000410489 109 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 AC024067.1-201ENST00000426199 223 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 AC098934.3-201ENST00000430450 190 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 AC091951.2-201ENST00000500762 203 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.27□□□□□ -2.37
SMKR1H3BMG3 CYP3A137P-201ENST00000562436 69 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 AC127455.1-201ENST00000565496 145 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 MIR2681-201ENST00000581814 105 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 AC005730.3-201ENST00000583067 366 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 AP000753.3-201ENST00000604083 169 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 AC084782.3-201ENST00000612282 578 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 AC138305.3-201ENST00000624988 240 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 U6.92-201ENST00000636464 89 ntBASIC0.27□□□□□ -2.37
SMKR1H3BMG3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
SMKR1H3BMG3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.26□□□□□ -2.37
SMKR1H3BMG3 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
SMKR1H3BMG3 MIR18A-201ENST00000362310 71 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms