Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNU6-360P-201ENST00000390944 104 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-131P-201ENST00000391144 107 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 AC108059.2-201ENST00000434626 151 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 Z98949.2-201ENST00000440996 144 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 OR9P1P-201ENST00000496431 281 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 SNORA31.11-201ENST00000516528 139 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-794P-201ENST00000517261 64 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 AC022254.1-201ENST00000567857 235 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 MIR5688-201ENST00000580619 83 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 Z83818.1-201ENST00000603584 150 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 AL353997.5-201ENST00000618886 171 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 MIR219B-201ENST00000637023 88 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-1020P-201ENST00000363684 107 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 Y_RNA.229-201ENST00000364347 113 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 SNORA12.1-201ENST00000390873 148 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 SNORA48.3-201ENST00000391081 134 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-381P-201ENST00000391259 108 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 FTH1P12-201ENST00000432137 551 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 MTND5P15-201ENST00000434246 349 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 AC245047.8-201ENST00000456455 284 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-1007P-201ENST00000516586 107 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 AL049861.1-201ENST00000603130 150 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 AC021506.2-201ENST00000612354 169 ntBASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MBD3L4A6NDZ8 SNORA25.6-201ENST00000364121 118 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 snoU2_19.4-201ENST00000364329 80 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 RNA5SP496-201ENST00000391240 109 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 AL138752.1-201ENST00000452964 351 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 RN7SKP164-201ENST00000516138 266 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 MIR3668-201ENST00000582138 75 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 MIR6840-201ENST00000611937 71 ntBASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-1084P-201ENST00000362498 107 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-163P-201ENST00000384396 106 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 MIR522-201ENST00000385071 87 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 MIR802-201ENST00000390235 94 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 RNU2-2P-201ENST00000410396 191 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 Y_RNA.793-201ENST00000411222 111 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 RN7SKP101-201ENST00000411376 320 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 CALM2P4-201ENST00000430810 426 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 Y_RNA.644-201ENST00000459006 113 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 SNORD11-201ENST00000459124 84 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 RNA5SP233-201ENST00000459153 113 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 Y_RNA.674-201ENST00000516362 113 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 MIR4308-201ENST00000580634 81 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 RNU2-4P-201ENST00000606190 192 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.93□□□□□ -2.1
MBD3L4A6NDZ8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-661P-201ENST00000362409 107 ntBASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-424P-201ENST00000384367 105 ntBASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 Y_RNA.587-201ENST00000391210 103 ntBASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 HMGN2P23-201ENST00000456759 269 ntBASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 RPL23AP42-201ENST00000471152 471 ntBASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 AC099513.1-201ENST00000490423 301 ntBASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 AC120024.3-201ENST00000603167 156 ntBASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MBD3L4A6NDZ8 Y_RNA.7-201ENST00000362352 102 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 U8.5-201ENST00000364528 136 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-47P-201ENST00000383866 107 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 RNU4-70P-201ENST00000384579 139 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 MIR616-201ENST00000385293 97 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 MT-TT-201ENST00000387460 66 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 U8.16-201ENST00000391279 133 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 MIR1267-201ENST00000408723 78 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 PIGPP3-201ENST00000425307 415 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 PGBD4P5-201ENST00000445958 426 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 NDUFA4P2-201ENST00000489989 244 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 CYCTP-201ENST00000504253 315 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 RNA5SP458-201ENST00000516188 119 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 Y_RNA.676-201ENST00000516393 96 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 RNA5SP168-201ENST00000516642 112 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-453P-201ENST00000516819 85 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 AL021707.8-201ENST00000609428 183 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 AL391903.3-201ENST00000612158 163 ntBASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
MBD3L4A6NDZ8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms