Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 Y_RNA.217-201ENST00000364214 105 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 Y_RNA.512-201ENST00000384518 102 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 SNORA36B-201ENST00000410438 131 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC093850.1-201ENST00000454121 251 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 Y_RNA.641-201ENST00000459414 105 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 SCARNA15.1-201ENST00000516384 125 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 SNORA27.4-201ENST00000516650 95 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC005357.1-201ENST00000588399 301 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AL512605.2-201ENST00000592972 256 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC136443.5-201ENST00000603741 370 ntBASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 Y_RNA.376-201ENST00000365638 108 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 Y_RNA.518-201ENST00000384552 113 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6-713P-201ENST00000384761 107 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 Y_RNA.574-201ENST00000384766 95 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 MIR891A-201ENST00000401237 79 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 MIR1289-2-201ENST00000408360 111 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AL358176.2-201ENST00000425769 204 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 SNRPGP10-201ENST00000432323 225 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RPS29P29-201ENST00000456396 171 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 SNORA59A-201ENST00000459326 152 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6-437P-201ENST00000459408 95 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 TRBVB-201ENST00000477100 408 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC114811.1-201ENST00000507207 168 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6-917P-201ENST00000516294 104 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6-570P-201ENST00000517051 105 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC090049.2-201ENST00000550377 109 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AL513534.2-201ENST00000603836 250 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AL360085.1-201ENST00000604713 532 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC007742.2-201ENST00000618226 398 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AL121890.5-201ENST00000620848 304 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 MIR8062-201ENST00000621515 85 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC106754.2-201ENST00000623006 233 ntBASIC1.24□□□□□ -2.21
TRBV4-1A0A0J9YWV2 Y_RNA.796-201ENST00000364268 102 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 Y_RNA.799-201ENST00000364992 102 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 SNORA2.2-201ENST00000365473 135 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6-514P-201ENST00000384208 107 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6-163P-201ENST00000384396 106 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 MTCO2P33-201ENST00000402100 465 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 PIGPP3-201ENST00000425307 415 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RPL23AP94-201ENST00000512518 302 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AL512310.8-201ENST00000550183 120 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AL161670.1-201ENST00000554348 137 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 MIR3664-201ENST00000579074 99 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC013791.1-201ENST00000616619 62 ntBASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.23□□□□□ -2.21
TRBV4-1A0A0J9YWV2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC134026.1-201ENST00000623249 2239 ntBASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6-144P-201ENST00000383951 107 ntBASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6-472P-201ENST00000384299 107 ntBASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 MT-TW-201ENST00000387382 68 ntBASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RNU6-131P-201ENST00000391144 107 ntBASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 RPL30P7-201ENST00000479312 323 ntBASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 DEFB108E-201ENST00000524692 240 ntBASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 AC068700.1-201ENST00000565862 3754 ntBASIC1.22□□□□□ -2.21
TRBV4-1A0A0J9YWV2 MIR335-201ENST00000362173 94 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-238P-201ENST00000363313 106 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-1209P-201ENST00000363655 107 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.176-201ENST00000363815 109 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.237-201ENST00000364439 102 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 SNORD50B-201ENST00000364995 70 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.459-201ENST00000384251 102 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-662P-201ENST00000384253 104 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR526A1-201ENST00000384897 85 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 SNORD41-201ENST00000386967 70 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-327P-201ENST00000516270 127 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 SNORD45.4-201ENST00000516629 73 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.714-201ENST00000517065 90 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR2681-201ENST00000581814 105 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC087685.1-201ENST00000587507 141 ntBASIC1.21□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.133-201ENST00000363428 110 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.275-201ENST00000364726 110 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 snoU2-30.1-201ENST00000365012 70 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.483-201ENST00000384380 101 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MLLT10P1-201ENST00000418346 262 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MTND2P23-201ENST00000422990 651 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 BTF3P11-201ENST00000426582 477 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 snoU13.15-201ENST00000459407 104 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 NDUFA4P2-201ENST00000489989 244 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-922P-201ENST00000516753 99 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 SCARNA24.2-201ENST00000516968 130 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-165P-201ENST00000517170 99 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AL160236.1-201ENST00000556317 195 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR5692C2-201ENST00000577959 77 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms