Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ClcnkaQ9WUB7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Gm11950-201ENSMUST00000121615 838 ntBASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Gm29518-201ENSMUST00000190858 372 ntBASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Gm17808-201ENSMUST00000200859 894 ntBASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
ClcnkaQ9WUB7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClcnkaQ9WUB7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClcnkaQ9WUB7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClcnkaQ9WUB7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.77□□□□□ -0.04
ClcnkaQ9WUB7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ClcnkaQ9WUB7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
ClcnkaQ9WUB7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClcnkaQ9WUB7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClcnkaQ9WUB7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Gm36967-201ENSMUST00000193814 266 ntBASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClcnkaQ9WUB7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms