Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp6ap1Q9R1Q9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp6ap1Q9R1Q9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atp6ap1Q9R1Q9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp6ap1Q9R1Q9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp6ap1Q9R1Q9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Atp6ap1Q9R1Q9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atp6ap1Q9R1Q9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp6ap1Q9R1Q9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp6ap1Q9R1Q9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atp6ap1Q9R1Q9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atp6ap1Q9R1Q9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atp6ap1Q9R1Q9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Gm13312-201ENSMUST00000119631 718 ntBASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Gm7367-201ENSMUST00000057611 492 ntBASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atp6ap1Q9R1Q9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Atp6ap1Q9R1Q9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atp6ap1Q9R1Q9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Atp6ap1Q9R1Q9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atp6ap1Q9R1Q9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.67■□□□□ 0.1
Atp6ap1Q9R1Q9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atp6ap1Q9R1Q9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms