Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm7506-201ENSMUST00000207758 815 ntBASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Gm10355-201ENSMUST00000097146 517 ntBASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Gm44450-201ENSMUST00000199528 114 ntBASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col13a1Q9R1N9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 AV026068-213ENSMUST00000223675 1171 ntBASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Gm10175-201ENSMUST00000086013 645 ntBASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col13a1Q9R1N9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col13a1Q9R1N9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms