Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim44Q9QXA7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim44Q9QXA7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Trim44Q9QXA7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim44Q9QXA7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim44Q9QXA7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
Trim44Q9QXA7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Trim44Q9QXA7 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.64■□□□□ 0.58
Trim44Q9QXA7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim44Q9QXA7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Gm18671-201ENSMUST00000214826 683 ntBASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim44Q9QXA7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim44Q9QXA7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Gm42642-201ENSMUST00000200683 355 ntBASIC18.62■□□□□ 0.57
Trim44Q9QXA7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim44Q9QXA7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Mir2861-201ENSMUST00000175539 82 ntBASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim44Q9QXA7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.6■□□□□ 0.57
Trim44Q9QXA7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trim44Q9QXA7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim44Q9QXA7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim44Q9QXA7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim44Q9QXA7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms