Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm5177-201ENSMUST00000183092 997 ntBASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Mir6990-201ENSMUST00000183724 91 ntBASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Gm27301-201ENSMUST00000184012 127 ntBASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-4Q9EQM3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Gm15358-201ENSMUST00000119249 520 ntBASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Gm22175-201ENSMUST00000175007 78 ntBASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-4Q9EQM3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nkx2-4Q9EQM3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nkx2-4Q9EQM3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-4Q9EQM3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Gm12428-201ENSMUST00000119844 727 ntBASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Gm11424-201ENSMUST00000121929 829 ntBASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms