Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Gm7284-201ENSMUST00000131667 944 ntBASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Col4a3bpQ9EQG9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a3bpQ9EQG9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.4■□□□□ 0.54
Col4a3bpQ9EQG9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col4a3bpQ9EQG9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.39■□□□□ 0.54
Col4a3bpQ9EQG9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Mir770-201ENSMUST00000103252 94 ntBASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Gm11950-201ENSMUST00000121615 838 ntBASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Col4a3bpQ9EQG9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Gm6623-201ENSMUST00000173570 544 ntBASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Gm27704-201ENSMUST00000185094 107 ntBASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms