Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Gm24589-201ENSMUST00000116692 94 ntBASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Gm12644-201ENSMUST00000119935 606 ntBASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Gm27867-201ENSMUST00000184778 125 ntBASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Birc2-201ENSMUST00000054878 378 ntBASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ssmem1Q9D9Y8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Gm34391-201ENSMUST00000203706 907 ntBASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ssmem1Q9D9Y8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ssmem1Q9D9Y8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Ssmem1Q9D9Y8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Ssmem1Q9D9Y8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ssmem1Q9D9Y8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ssmem1Q9D9Y8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ssmem1Q9D9Y8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Mir6404-201ENSMUST00000183699 94 ntBASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Gm27741-201ENSMUST00000185060 237 ntBASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Gm43347-201ENSMUST00000200226 580 ntBASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ssmem1Q9D9Y8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms