Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd1Q9D0E3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lysmd1Q9D0E3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.08■□□□□ 0.33
Lysmd1Q9D0E3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Lysmd1Q9D0E3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lysmd1Q9D0E3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lysmd1Q9D0E3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Lysmd1Q9D0E3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lysmd1Q9D0E3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Mir1247-201ENSMUST00000116706 82 ntBASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd1Q9D0E3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Gm24694-201ENSMUST00000180054 110 ntBASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Gm27663-201ENSMUST00000184839 110 ntBASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Lysmd1Q9D0E3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Gm12008-201ENSMUST00000117791 755 ntBASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Gm7775-201ENSMUST00000218871 853 ntBASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lysmd1Q9D0E3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.05■□□□□ 0.32
Lysmd1Q9D0E3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms