Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfdn1Q9CWM4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Gm9959-201ENSMUST00000068277 390 ntBASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfdn1Q9CWM4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Gm12922-201ENSMUST00000120626 809 ntBASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfdn1Q9CWM4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfdn1Q9CWM4 Phf7-203ENSMUST00000226565 1971 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms