Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sft2d3Q9CSV6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Gm27357-201ENSMUST00000183754 135 ntBASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sft2d3Q9CSV6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Gm28033-201ENSMUST00000184224 96 ntBASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sft2d3Q9CSV6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Sft2d3Q9CSV6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms