Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retreg3Q9CQV4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Gm24589-201ENSMUST00000116692 94 ntBASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Gm6443-201ENSMUST00000203599 874 ntBASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Gm17872-201ENSMUST00000222550 532 ntBASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retreg3Q9CQV4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Gm19324-201ENSMUST00000213229 1169 ntBASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Retreg3Q9CQV4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Gm14363-201ENSMUST00000122304 409 ntBASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Gm28659-201ENSMUST00000188013 759 ntBASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Gm45878-201ENSMUST00000211839 241 ntBASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms