Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Q9CQC3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Q9CQC3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Q9CQC3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.65■□□□□ 0.26
Q9CQC3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.65■□□□□ 0.26
Q9CQC3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.65■□□□□ 0.26
Q9CQC3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CQC3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.64■□□□□ 0.26
Q9CQC3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.64■□□□□ 0.25
Q9CQC3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.64■□□□□ 0.25
Q9CQC3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.64■□□□□ 0.25
Q9CQC3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Q9CQC3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Q9CQC3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CQC3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Q9CQC3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Q9CQC3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Q9CQC3 Gm7284-201ENSMUST00000131667 944 ntBASIC16.63■□□□□ 0.25
Q9CQC3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Rprl3-201ENSMUST00000157400 290 ntBASIC16.63■□□□□ 0.25
Q9CQC3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Q9CQC3 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.63■□□□□ 0.25
Q9CQC3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.63■□□□□ 0.25
Q9CQC3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Q9CQC3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CQC3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.63■□□□□ 0.25
Q9CQC3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.63■□□□□ 0.25
Q9CQC3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.62■□□□□ 0.25
Q9CQC3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.62■□□□□ 0.25
Q9CQC3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.62■□□□□ 0.25
Q9CQC3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Q9CQC3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.62■□□□□ 0.25
Q9CQC3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Q9CQC3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CQC3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Q9CQC3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Q9CQC3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CQC3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CQC3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CQC3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms