Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd3Q99LE3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Mir6404-201ENSMUST00000183699 94 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44357-201ENSMUST00000195897 142 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm19658-201ENSMUST00000196231 138 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44367-201ENSMUST00000196836 138 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44350-201ENSMUST00000197197 138 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44390-201ENSMUST00000197533 144 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44313-201ENSMUST00000198018 138 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44486-201ENSMUST00000198508 138 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44314-201ENSMUST00000199263 138 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44394-201ENSMUST00000199558 138 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44484-201ENSMUST00000199873 138 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44466-201ENSMUST00000200264 138 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Gm44359-201ENSMUST00000200671 138 ntBASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lysmd3Q99LE3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Gm25406-201ENSMUST00000157599 105 ntBASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Lysmd3Q99LE3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Gm6296-201ENSMUST00000222599 943 ntBASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Rps4l-201ENSMUST00000071745 943 ntBASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd3Q99LE3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd3Q99LE3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Lysmd3Q99LE3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd3Q99LE3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms